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Detailed information on CNT30212755


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675624Helianthus annuusSetaria viridis62.725.0481.65158forward
CNT30378101Helianthus annuusArabidopsis thaliana84.1324.0482.55212forward
CNT30526134Helianthus annuusPhaseolus vulgaris74.629.5182.45188forward
CNT30630919Helianthus annuusVigna unguiculata96.0318.1780.99242forward
CNT30314068Helianthus annuusCamelina sativa74.612.481.91188forward
CNT30606420Helianthus annuusGossypium raimondii75.7933.4579.58191forward
CNT30624770Helianthus annuusDaucus carota94.8437.8284.1239forward
CNT30477326Helianthus annuusArabidopsis halleri99.628.3981.67251forward
CNT30362691Helianthus annuusSorghum bicolor60.3215.3782.89152forward
CNT30704690Helianthus annuusPrunus avium75.799.484.29191forward
CNT3055928Helianthus annuusAmborella trichopoda73.4121.0782.16185forward
CNT30318584Helianthus annuusAsparagus officinalis57.1411.8681.94144forward
CNT30551470Helianthus annuusOryza brachyantha59.1334.2580.54149forward
CNT30113681Helianthus annuusFicus carica100.434.7584.98253forward
CNT30724682Helianthus annuusLupinus angustifolius50.7952.2486.72128forward

Expression of CNT30212755

Peptides detected in this lncRNA

>peptide 1 (47 aa)
LENLVLLKHFTRDVEWQVIGVHNTLYKPKVFWNQLFTVVHDENPPDI*

>peptide 2 (70 aa)
MLSGKSSESTTPFTNPRYSGISSSQLSMMKTLLTYSLMLFIFLRVSKRSNGALLGTKRIALNSSCPSTEKC

Sequence

>CNT30212755
ACCTTGAGAATCTTGTTCTGTTGAAGCATTTCACGAGAGATGTTGAGTGGCAAGTCATCGGAGTCCACAACACCCTTTACAAACCCAAGGTATTCTGGAA
TCAGCTCTTCACAGTTGTCCATGATGAAAACCCTCCTGACATATAGCTTGATGTTGTTCATCTTCTTACGGGTGTCAAAAAGATCAAATGGAGCCCTCTT
AGGCACGAAGAGGATCGCTTTAAACTCCAGCTGTCCTTCAACAGAGAAGTGT