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Detailed information on CNT30212676


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517898Helianthus annuusJuglans regia40.2815.885.31143forward
CNT30729348Helianthus annuusCorchorus capsularis96.6237.983.97343forward
CNT30381694Helianthus annuusManihot esculenta63.9436.6185.02227forward
CNT30402735Helianthus annuusBeta vulgaris79.7220.7881.27283forward
CNT30526202Helianthus annuusPhaseolus vulgaris2031.8491.5571forward
CNT30158908Helianthus annuusPistacia vera96.6220.9983.97343forward
CNT3094731Helianthus annuusSolanum tuberosum36.348.5987.6129forward
CNT30305074Helianthus annuusTriticum aestivum28.1715.9583100forward
CNT30394033Helianthus annuusTriticum turgidum54.3714.2680.31193forward
CNT30562110Helianthus annuusActinidia chinensis29.312.5985.58104forward
CNT3082269Helianthus annuusBrassica juncea58.0331.7980.58206forward
CNT30652736Helianthus annuusRosa chinensis76.6246.9879.78272forward
CNT30625209Helianthus annuusDaucus carota47.3224.8984.52168forward
CNT30323609Helianthus annuusAsparagus officinalis81.6917.4280.34290forward

Expression of CNT30212676

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MVSEQISQLGPVLAVFMNTQLQILGEGFIEFVVIILVLSNLIKHLDAFLHKILPDNLKNLVLLKHFTRDVEWQVIGVHDTLYKPKVF

>peptide 2 (30 aa)
LTRDVINILLALFHTGHIVFQAGQLITTLG*

Sequence

>CNT30212676
TCTCACCCGTGATGTAATAAATATCCTTCTGGCCCTCTTTCATACGGGTCACATAGTCTTTCAAGCTGGTCAACTCATCACCACTCTTGGTTGAATGGTA
TCTGAGCAAATCAGCCAACTTGGACCTGTTCTGGCTGTCTTCATGAATACCCAACTTCAGATTCTTGGAGAAGGCTTCATAGAATTTGTTGTAATCATCC
TTGTTCTCAGCAATCTCATTAAACATCTCGATGCATTTCTTCACAAGATTCTTCCTGATAACCTTAAGAATCTTGTTCTGTTGAAGCATTTCACGAGAGA
TGTTGAGTGGCAAGTCATCGGAGTCCACGACACCCTTTACAAACCCAAGGTATTC