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Detailed information on CNT30212621


BLAST search results

BLAST vs Swiss-Prot:
sp|P18260|ATPAM_HELAN, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618998Helianthus annuusSesamum indicum66.0970.7593.071154forward
CNT30200883Helianthus annuusPisum sativum80.3696.6993.31403forward
CNT3091389Helianthus annuusSolanum tuberosum6.4728.6892.92113forward
CNT30194088Helianthus annuusSecale cereale48.5786.4493.99848forward
CNT30226090Helianthus annuusHordeum vulgare31.2754.1791.39546forward
CNT30543277Helianthus annuusBrassica napus15.3543.7991.79268forward
CNT30438827Helianthus annuusAegilops tauschii19.1399.793.71334forward
CNT30127030Helianthus annuusCorymbia citriodora12.2610094.39214forward
CNT30684056Helianthus annuusTriticum urartu85.5762.5493.441494forward
CNT30596036Helianthus annuusOryza meridionalis8.1953.1692.31143forward
CNT30481419Helianthus annuusChara braunii16.6733.8485.22291forward
CNT30571978Helianthus annuusVitis vinifera87.2933.0696.521524forward
CNT30103343Helianthus annuusOryza rufipogon22.0551.6190.65385forward

Expression of CNT30212621

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MRAFHYRGNIPPWHSQNTGPEIAEEQDPKRWLLQEWNIP*

>peptide 2 (33 aa)
MILLILDIRGNTAFNFKELYFRYSYRSDSSLYY*

>peptide 3 (30 aa)
MTKICFSIGSGAYCGCFGTSVSLAPLLSNA*

>peptide 4 (35 aa)
MAQPEYGARNCRGAGSEAVAATRMEYSIAFASERI*

>peptide 5 (34 aa)
MPESQHPGLTQIEQGRPLRDIVPIPVLNYRRLVS*

Sequence

>CNT30212621
TTTTTCTTTTTTATATTGTGTAAGGCAAAGCGCATTCCTTTAAGAATGTATCTGGTTCCATTTTTCTTTCGTTAGTTAAGCCACCTTTTTCTAAAAGGGA
TTGTAGTAATTCTGTTTTTATACTCTTTAAAATGGCTCTCTCATATTGAGAAATTCTGTCTAGTGGCATTCGATCACAGAATCCATTGACAGCTGCATAA
ATGACTAAAATTTGTTTTTCAATTGGAAGTGGTGCATATTGTGGTTGTTTCGGTACTTCTGTAAGCCTTGCACCTCTATTGAGTAATGCCTGAGTCGCAG
CATCCAGGTCTGACCCAAATTGAGCAAGGGCGGCCACTTCGCGATATTGTGCCAATTCCAGTTTTGAACTACCGCAGACTTGTTTCATAGTTTTCAACTG
AGCGGCAGACCCAACACGACTGACAGATAAGCCGACGTTAATAGCAGGTCTAATTCCGCGATAAAAGAGCTCTGTTTCCGAACAGATTTGTCCATCAGTA
ATGGGGATCACATTAGTAGGAATATAGGCTGATACGTCTCCAGCTTGTGTTTCAATGACGGGTAAGGCGGTCAAGCTACCTGCGCCTGTCTGGTCCGATC
GTTTAGCGGCTCTTTCTAAGAGACGGGAATGTAAATAGAAAACATCCCCTGGGAAAGCCTCACGGCCTGGTGGTCGGCGTAACAATAATGACATTTGTCG
ATATGCCACTGCCTGTTTACTAAGATCATCATAGATTATTAATGCGTGCATTCCATTATCGCGGAAATATTCCCCCATGGCACAGCCAGAATACGGGGCC
AGAAATTGCAGAGGAGCAGGATCCGAAGCGGTGGCTGCTACAAGAATGGAATATTCCATAGCATTCGCTTCTGAAAGAATTTGAACTAATTGTGCCACAG
TTGAGCGTTTCTGTCCAATCGCTACATAGACACAATACAATGTCTCACTCTCAGAGGTGCTCCTTGAGTTCATTTGCTTTTGGTTTAATATGGTATCGAT
AGCAATAGCTGTTTTTCCAGTTTGTCGGTCCCCGATTATAAGTTCTCGTTGACCACGGCCTATAGGAACCAGGCTATCTACCGCTTTTAACCCAGTTTGC
ATAGGCTCGTGCACAGATTTACGTTCAATAATCCCAGGGGCTTTCACTTCGACACGTCTTCGCTCGTGATCGCTTAGAGCCCCTCTTCCATCAATAGGTA
CTCCCAAGGCGTCGACCACACGCCCTAGCATAGCCTTTCCCGCAGGGACATCCACAATAGAGCCAGTGCGCTTGACAAGATCTCCTTCTTTAATAGCAGT
ATCACTACCAAAGACAACAATCCCTACATTCTCATTCTCAAGATTCAAGGCTATTCCTTTCACACCGCTGGCAAATTCAACCATTTCCCCAGCTTGAATC
TCGTTCAACCCATAAACACGTGCAATCCCATCTCCAACTGAGACCACTCGACCAATCTCATCCACTTGAAAATTCGTGTAAAAGTTGCTAATTCTACTTT
CTAATAGAGTCGTTAGTTCAGCAGCTCTCGGAGAGAATTCCATGATTCTACTGATTTTGGATATAAGGGGGAATACCGCTTTCAATTTCAAAGAGCTCTA
TTTCCGCTATTCTTATAGATCAGATTCGAGCTTGTACTACTAGAACTAGGAGTTGAGATAGCGCGCGGAACACCAACACAATCCTTTGTTAAATGTCTGC
GAGCTCCTTCTTCTTTCGTGAAAGCATACGAGTCGTTATGAGTTAG