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Detailed information on CNT30212263


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT001339, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30606094Helianthus annuusGossypium raimondii9.421.8491.5783forward

Expression of CNT30212263

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 2 (34 aa)
GTLGEPPTPTTVHVRSILDLTNCPSYLLYEMGAA*

>peptide 3 (44 aa)
MIFIIHRREESLLVFFVKINDLLNSAVRVLLSYGGSHWFKSNSR*

>peptide 4 (70 aa)
NPRRAADSNYRPCTIHTRSDQLPILPPLRNGSSLNRENGVVGEQYKRRAARRRSRMLHPRWRKSSSRKHH*

Sequence

>CNT30212263
GGAACCCTAGGAGAGCCGCCGACTCCAACTACCGTCCATGTACGATCCATACTAGATCTGACCAACTGCCCATCCTACCTCCTCTACGAAATGGGAGCAG
CCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGAAGTAGAATGTTGCACCCTAGATGGCGAAAGTCCAGTAGC
CGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGG
GTGACCGATAGCGAAGTAGTACCGTGAGGGAAGGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGG
AGCCCGGGGCTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCCGTAGCGAAAGCGAGT
CTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTAATGTGAAACTAAGTGGAGGTCCGAACCGAC
TGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGTAGT
TGACTGGACATCTAGGGATCATATTGATCGGTATTGCTTCTAAGTAATATGATATTTATAATCCATCGACGGGAGGAGTCCCTTTTGGTTTTCTTTGTGA
AGATAAATGACCTACTTAACTCAGCGGTTAGAGTATTGCTTTCATACGGCGGGAGTCATTGGTTCAAATCCAATAGTAGGTAG