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Detailed information on CNT30210789


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ASR1|EF2_ARATH, E-value = 1e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513072Helianthus annuusJuglans regia54.1447.3482.65196forward
CNT30728649Helianthus annuusCorchorus capsularis58.5619.4782.55212forward
CNT30224110Helianthus annuusHordeum vulgare24.0329.3985.0687forward
CNT30391299Helianthus annuusTriticum turgidum20.1713.2784.9373forward
CNT30510660Helianthus annuusSolanum lycopersicum59.3952.786.05215forward
CNT30143750Helianthus annuusMedicago truncatula59.3928.0784.19215forward
CNT30665536Helianthus annuusTriticum dicoccoides21.2711.6887.0177forward
CNT30361875Helianthus annuusSorghum bicolor58.8419.3181.22213forward
CNT30370118Helianthus annuusOryza glumipatula23.7613.9284.8886forward
CNT3024028Helianthus annuusPopulus trichocarpa59.3929.0982.33215forward
CNT30575986Helianthus annuusOryza barthii23.767.2884.8886forward

Expression of CNT30210789

Peptides detected in this lncRNA

>peptide 1 (60 aa)
TTIGSDFARRFSPSTSLGRSDATLHWTATRTTGETENFMARMGWASTSFSFVNVAFLVMN*

Sequence

>CNT30210789
ACAACCATAGGGTCAGATTTCGCCAGACGTTTCAGTCCTTCAACAAGCTTGGGTAGGTCAGACGCGACCTTGCACTGGACTGCAACACGGACCACAGGTG
AGACGGAAAACTTCATGGCTCGGATGGGGTGGGCGTCGACTTCCTTTTCGTTTGTTAACGTTGCGTTTTTGGTGATGAACTGATCCAAACCAACCATAGC
CACTGTGTTACCACACGGTACTCGTTTCCGTTTCTTTCTCCCTTGAAGCTTTTCAAAGCTTCATCGGTCATCTCGTAGTAAAGAGAGATACCAGTGGATT
TGATTGTTATACCACGTTCTGCTTCATCAGCACGGGTATCAGTCATACGAACATCACCAGCA