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Detailed information on CNT3021062


BLAST search results

BLAST vs Swiss-Prot:
sp|O49169|EF1A_MANES, E-value = 1e-131

BLAST vs NONCODE:
NONMEST004097, E-value = 5e-124

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30637620Citrullus lanatusCapsicum annuum43.8613.0285.6250forward
CNT30287202Citrullus lanatusTriticum aestivum83.1665.9283.97474forward
CNT30598511Citrullus lanatusFraxinus excelsior82.9872.6686.05473forward
CNT30176122Citrullus lanatusVigna angularis89.344.9685.46509forward

Expression of CNT3021062

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MVHLNRLYFSSQSSWGKGDNHTGLDNTSFHTTHWNSSNTTNLVDILKWKTKGFV*

>peptide 2 (29 aa)
AISNLPWMVHDNNLGSEIGSFLSRVILGI*

>peptide 3 (32 aa)
PFPICPGWFMIITWEVKLAASLAGSSLEFEAT*

Sequence

>CNT3021062
GCCATTTCCAATCTGCCCTGGATGGTTCATGATAATAACTTGGGAAGTGAAATTGGCAGCTTCCTTAGCAGGGTCATCCTTGGAATTTGAGGCAACGTAA
CCACGCTTGAGATCCTTCACAGCAACATTCTTCACGTTGAACCCCACATTATCACCAGGGAGAGCTTCTTGGAGAGCTTCATGGTGCATCTCAACAGACT
TTACTTCAGTAGTCAGTCCAGTTGGGGCAAAGGTGACAACCATACCGGGCTTGATAATACCAGTTTCCACACGACCCACTGGAACAGTTCCAATACCACC
AATCTTGTAGACATCCTGAAGTGGAAGACGAAGGGGTTTGTCTGATGGTCTCTTAGGCTCTTGGATCAGGTCAAGGGCCTCAAGAAGGGTTGGTCCCTTG
TACCAGTCGAGGTTTGTAGATCTTTCAATCATGTTGTCACCCTCAAATCCAGAGATCGGGACGAAGGGAATTTTGTCTGGGTTGTACCCAACCTTCTTGA
GGTAAGAAGAAACTTCCTTCACGATTTCATCGTACCTAGATTTTGAGTACTTGGGAGTGGTAGCATCCAT