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Detailed information on CNT30210280


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 3e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30503251Helianthus annuusNicotiana attenuata20.7520.9282.97182forward
CNT30711848Helianthus annuusGlycine max17.4530.9182.35153forward

Expression of CNT30210280

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MKNANMENIASLPFLISLTFNSANWSGSLARPNGSNGPP

>peptide 2 (63 aa)
MKNANMENIASLPFLISLTFNSANWSGSLARPNGVAQVRCKVLNRTLSGHIRLDEECKHGEHS*

Sequence

>CNT30210280
CACAAATTTATTTAAGTGTTTAGTTTTTTTATTCTGTTAATTTTAACTTCCAAGATTTGGTCTTATAAAAGAAGAATTGGTAATGTACTTCATCTATTCT
CAAATAGTATTAATTTCCTATCAATTAAGAGTGTGTTTCTAAATTCAATGTTATGTTTCAGTTCTGAATGTTTATATAACCTAGCCCAAGTCTGTCACCA
TATTGGTCAAATTTCAGCCTGGCTACTGTGACAATGTGACATGAAAAGATAGTCTCATGTTATCTATAAGACTGGTGCATCCTTGAATCTTATTAGGCAG
GTGCTTAAAGACCATTGTAGTCTTTTAAGTTATATACTTATATGTAAACCCTGATGCAAATATGACAAGTTACAACCTTAAACACGACTCTTGCAATTAT
TGAACCGTTTCTCATAGTAACAGAATATATAAAGTACACGAACATCTGAATGTCATTGTTTTAGAGCACAAAAGGTTGTTTACAGGGTTGGGACTCGTTC
GATGTTTCCAGAAATGACGGTTAGCAAGTTGTTTCCAAAGGGGTCACTCAAGTGAGATGCAAGGTTCTCAACAGGACCTTGTCCGGTCACATACGCTTGG
ATGAAGAATGCAAACATGGAGAACATAGCTAGTCTACCATTCTTGATCTCCTTAACCTTCAATAGTGCAAACTGGTCTGGGTCCTTAGCCAGACCCAATG
GGGTCGCTCAAGTGAGATGCAAGGTTCTCAACAGGACCTTGTCCGGTCACATACGCTTGGATGAAGAATGCAAACATGGAGAACATAGCTAGTCTACCAT
TCTTGATCTCCTTAACCTTCAATAGTGCAAACTGGTCCGGGTCCTTAGCCAGACCCAATGGGTCAAACGGTCCACCA