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Detailed information on CNT30209850


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3098190Helianthus annuusSolanum tuberosum17.9830.8994.38160reverse complement

Expression of CNT30209850

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MGCKRRLYHLKVGVSFLTIPRSSFIPPPFLSLFRKFRT*

>peptide 2 (39 aa)
MLYISGARLVADEQVRIASTKIDGIRPRNAILVRYRLGIS

>peptide 3 (63 aa)
MLNTNFLVLPLSHGDRPYAPRVKRRGHFSLLYRSGSSSKEQQWLVACPIDLSRGWDVKEGFII*

Sequence

>CNT30209850
GACCCTCTTTTAAACGGAAAAAGATCAGTCCATATAACTAGATCGGAAAATTCACATACATGAAGGGGTGAGGCTTGAGTCTACTTTCTATTACAAAATT
AGAGTAGAAAGAAGACTCACTTCTCAATTCGAAGGCGACACGCCTTGCTGCCTTTACGAGGATTTCCCTTCTTTGCATCTTTTGTTTGAAATAGGACCGG
GCAGGGTAGAATCCGGTTGGAAAGAAAGAAAGAAACCACCGGAGTGGGGGATTGTCCTGTCCTCCTCACTGACCCCAAAGAAGGTGGCTCTGCCACTAAG
CAGGCCGACATAGAGGGCACCAAATGCCTAAACAAGAAAAGAACCAACTATATGCTTAACACAAACTTTCTGGTCCTCCCTCTATCACATGGGGATCGGC
CCTACGCACCGAGGGTGAAGCGTAGAGGTCACTTTAGCTTGTTGTACCGGAGTGGTTCATCGTCAAAAGAACAACAATGGCTTGTAGCATGTCCTATTGA
TTTGTCTAGGGGATGGGATGTAAAAGAAGGCTTTATCATCTAAAGGTAGGGGTGAGCTTTCTCACTATACCTCGCTCTTCTTTTATCCCGCCTCCTTTCT
TATCCCTGTTCCGTAAATTTCGTACGTAGACAGTTAGTTGCTCTGACTAGTTTTTTAGTGCAAAAAAGGACCAACGACGACCCTATCCTAAAGGAGAAGA
AGGAGTAGGAGTAGATCGGAGAATCTTTTTTGATTCCAGCCGAGAAGACTAGTAAAAGGAAGGACCAAGAATGTTATATATTTCAGGAGCTAGATTAGTT
GCCGATGAACAAGTAAGAATTGCCTCAACAAAAATAGATGGAATTAGGCCTAGAAATGCCATTCTGGTTCGTTATCGATTAGGTATCAGT