Detailed information on CNT30209058


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703316Helianthus annuusQuercus lobata46.146.2585.92142forward
CNT30717425Helianthus annuusMalus domestica golden46.146.4183.1142forward

Expression of CNT30209058

Peptides detected in this lncRNA

>peptide 1 (46 aa)
PGMVTLACNSSEGVKDGWTLIQQSQVGSIGAQTGLPVPSCELDHVT*

Sequence

>CNT30209058
ACCGGGCATGGTAACGCTTGCCTGTAACTCAAGTGAGGGTGTTAAAGACGGTTGGACGCTGATTCAGCAAAGTCAGGTTGGCTCCATTGGTGCACAAACT
GGCTTGCCCGTTCCAAGTTGTGAGTTGGACCATGTGACTTGAGCGAAGGCTTGGGTCACGTGGTCCCTAAAGTAGGGGGCACTGCGTAAGGCTGGCTTCA
CAGAGCCGCGAAAACCCCTCGCTCACGACAGTGGAAGGATTACAAGTCGGGGCTCCATGGCTCCATAATAACCTGCTGGGCTGTCTCAAATGAACAACCA
TCTTTTTT