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Detailed information on CNT30209019


BLAST search results

BLAST vs Swiss-Prot:
sp|P37392|TBB1_LUPAL, E-value = 1e-125

BLAST vs NONCODE:
NONGMAT000204, E-value = 3e-101

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692476Helianthus annuusOryza sativa34.3750.0978.75287forward
CNT30377201Helianthus annuusArabidopsis thaliana46.5968.0184.58389forward
CNT30617295Helianthus annuusSesamum indicum22.9946.8383.85192forward
CNT30728062Helianthus annuusCorchorus capsularis54.7352.4782.06457forward
CNT30629386Helianthus annuusVigna unguiculata15.3349.6181.25128forward
CNT30196370Helianthus annuusPisum sativum52.3445.8684.9437forward
CNT30486254Helianthus annuusOlea europaea20.644.9186.63172forward
CNT30710178Helianthus annuusGlycine max34.0166.9884.51284forward
CNT30291318Helianthus annuusTriticum aestivum30.977.4884.5258forward
CNT30390564Helianthus annuusTriticum turgidum23.4764.4784.18196forward
CNT30567082Helianthus annuusActinidia chinensis37.0170.2385.11309forward
CNT30542792Helianthus annuusBrassica napus30.7859.2284.44257forward
CNT30442409Helianthus annuusAegilops tauschii35.4544.1881.76296forward
CNT30252641Helianthus annuusAvena sativa57.8459.4180.54483forward
CNT30313575Helianthus annuusCamelina sativa18.3265.6780.39153forward
CNT3059902Helianthus annuusArabidopsis lyrata5.9921.659050forward
CNT30614070Helianthus annuusArabis alpina49.730.0385.06415forward
CNT305432Helianthus annuusZea mays20.9647.6886.86175forward
CNT30364844Helianthus annuusSorghum bicolor44.0784.482.88368forward
CNT30595966Helianthus annuusOryza meridionalis21.0828.7184.09176forward
CNT30369350Helianthus annuusOryza glumipatula37.3744.8984.29312forward
CNT30433323Helianthus annuusPapaver somniferum67.0751.3382.68560forward
CNT30570854Helianthus annuusVitis vinifera18.275.6286.84152forward
CNT3054138Helianthus annuusAmborella trichopoda37.9662.5282.65317forward
CNT3024644Helianthus annuusPopulus trichocarpa67.0727.3883.39560forward
CNT30330123Helianthus annuusDioscorea rotundata42.6334.9785.11356forward
CNT3099978Helianthus annuusOryza rufipogon36.4137.5383.22304forward
CNT30333708Helianthus annuusCynara cardunculus40.2441.4884.52336forward
CNT30602704Helianthus annuusGaldieria sulphuraria16.4121.9283.94137forward
CNT3050576Helianthus annuusCucumis sativus32.8154.4781.75274forward

Expression of CNT30209019

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MKKWRRGNGMRLTASLRRSEAPQQCQRPSEMGIQRT*

>peptide 2 (32 aa)
MRSGYSSRILEMRRVPIPDPVPPPNEWHTWKPG

>peptide 3 (45 aa)
MQESLPTEHSGKLLAHPPEHFLDRRRVTNECRRHFKPGWRDITNR*

Sequence

>CNT30209019
TCCAATTGCATGCCATTAAGCAGATGACAAATCTATCAAACCATACAGCAATCAAACAAAACAAAACCTCCGATTAAGCCCCCTCCGCAAGTTCTTCCTC
TTCATCTTCATAATCATACCCTTCCTCATCGGCAGTCGCATCTTGATACTGCTGGTATTCAGAAACCAAATCATTCATATTGCTCTCCGCTTCCGTAAAC
TCCATCTCATCCATTCCTTCACCAGTGTACCAATGCAAGAAAGCCTTCCTACGGAACATAGCGGTAAACTGCTCGCTCACCCGCCTGAACATTTCCTGGA
TCGACGTCGAGTTACCAATGAATGTAGACGCCATTTTAAGCCCGGTTGGAGGGATATCACAAACCGTTGACTTAACATTGTTGGGGATCCACTCAACAAA
GTAAGAAGAGTTCTTGTTCTGGACATTGATCATTTGTTCGTCAACTTCTTTTGTGCTCATTTTGCCACGGAACATGGCGGATGCCGTCAGGTACCGCCCA
TGACGGGGATCAGCTGCACACATCATGTTTTTGGCATCCCACATTTGTTGGGTGAGTTCAGGTACAGTTAGTGCGCGGTAATGCTGGGACCCACGTGATG
TTAGGGGTGCAAATCCAACCATGAAGAAGTGGAGGCGGGGGAATGGAATGAGGTTGACCGCAAGCTTGCGGAGATCAGAGGCTCCACAACAGTGTCAGAG
ACCTTCGGAGATGGGAATACAGAGAACGTAAGCATCATGCGGTCCGGGTATTCTTCTCGGATCTTGGAAATGAGAAGGGTTCCCATTCCTGACCCGGTCC
CACCACCCAACGAGTGGCACACCTGGAAACCTGGA