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Detailed information on CNT30208971


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675387Helianthus annuusSetaria viridis71.8172.1782.59293forward
CNT30511593Helianthus annuusSolanum lycopersicum70.3444.0992.33287forward
CNT3037013Helianthus annuusCucumis melo90.6947.0796.49370reverse complement
CNT30497700Helianthus annuusDigitaria exilis33.0924.6890.37135reverse complement
CNT30333622Helianthus annuusCynara cardunculus20.5911.6786.984reverse complement
CNT30115272Helianthus annuusEutrema salsugineum71.8160.2992.83293forward

Expression of CNT30208971

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MTRSIRSGTRHLFSLFNSLTTRKNHCSTL*

Sequence

>CNT30208971
GGAGCGGATAACTGCTGAAAGCATCTAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCCTATTCCAACTTCCCCAAAGCCTCCGGTAGCACAGCCGAGA
CAGCGACGGGTTCTCTGCCCCTGCGGGGATGGAGCGACAGAAGTTTTGAGAATTCAAGAGAAGGTCACGGCGAGACGAGCCGTTTATCATTACGATAGGT
GTCAAGTGGAAGTGCAGTGATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAACCTTGTTCCTACATGACCCGATCAATTCGATCGGGCACT
CGCCATCTATTTTCATTGTTCAACTCTTTAACAACACGAAAAAACCATTGTTCAACTCTTTGACAACATGAAAAACCAAAAGCTCTGCCCTCCCTCTCTA
TCTATCCA