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Detailed information on CNT30208936


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 4e-53

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30269781Helianthus annuusChenopodium quinoa73.5650.1995.621483forward
CNT30713553Helianthus annuusMalus domestica golden30.0189.7696.36605forward
CNT30627950Helianthus annuusDaucus carota21.1899.396.96427forward
CNT30722943Helianthus annuusTriticum spelta73.0773.1794.091473forward

Expression of CNT30208936

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MFEYQALRRRSNPCHTPRKSSNDLQQKGTCTRNRHRWVGREYLGARDNSL*

>peptide 2 (44 aa)
MGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP*

>peptide 3 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 4 (59 aa)
MPFEPRASWFSPKCIEAQQLTGHLGVKHYFGAGRESGTKSRQTLNTRYDLKITGVKVVQ*

Sequence

>CNT30208936
TCAATAAAATAAGCAGGGACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGATTTGAAAATAAGCATAGATCCGGAGAT
TCCCAAATAGGTTAACCTTTCAAACTGCTGCTGAATCCATGGGCAAGCAAGAGACAGCCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGC
AAAAGTGATTCCCGTAGTAGCGGTGAGCGAAACCTAAACCGTGAAAACAGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCAGTAGAA
TGCTGCACCCTAGATAGCGAAAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGAACCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGC
AAGGACCACCTTGCAAGGCTAAATACTCTTGGGTGACCGATAGCGAAGTAGTACCGTGAGGGAAAGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAA
CATGAAACCGTAAGGCAGTGGCTTGGTTAAGGGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCAGAGCCGTAGCGAAAACGAG
TCTTCATAGAGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTACCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGA
CTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCGTTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCATTGAGGCGCAGCAG
TTGACTGGACATCTAGGGGTAAAGCACTATTTCGGTGCGGGCCGCGAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCTCAAAATAA
CAGGGGTTAAGGTCGTCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAG
TGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGCAATAGCTCAACGATCGAGCGCTCTTGCA
CCGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATACATCGGTAGGGGAGCGTTCCGCCTTAGAGTGAAGCACCCACGCGAGCG
GTAGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGT
CCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCAAAAGGCGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTTGGTCCCGAGGGACG
GAGGAGGCTAGGTTAGCCAAAAGATGGTTATCGGTTCAAGGACGTAAGGTGACCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGAAAATTCCTCGAGCCAA
TGTTCGAGTACCAGGCGCTACGACGCAGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTACCTGTACCCGAAACCG
ACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCGTAACTTTGGGAGAAGGGGTGCCTCCTC
ACAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAG
TTCCAGAAGGTCAAGGAAGTTGGTGACCTGATGACAGGGGAGCCGACGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAATGGTCCTAGGGTAGCGA
AATTCCTTGTCGGGTAAGTTCCAACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTTGAAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGATGC
GGACTACCTGCACCTT