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Detailed information on CNT30208772


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001412, E-value = 2e-83

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30283003Helianthus annuusChenopodium quinoa67.138.0195.87363reverse complement
CNT3020470Helianthus annuusCitrullus lanatus22.1822.2698.33120reverse complement
CNT3094274Helianthus annuusSolanum tuberosum39.1971.86100212reverse complement
CNT30300808Helianthus annuusTriticum aestivum85.9534.5297.2465reverse complement
CNT30660235Helianthus annuusTriticum dicoccoides85.9549.4297.2465reverse complement
CNT3067934Helianthus annuusLeersia perrieri42.7101.3291.77231reverse complement
CNT30644906Helianthus annuusCannabis sativa18.8531.8795.1102reverse complement
CNT30118993Helianthus annuusCitrus clementina50.6577.8495.26274forward
CNT30331625Helianthus annuusDioscorea rotundata17.5629.8796.8495forward
CNT3099471Helianthus annuusOryza rufipogon35.375.7998.43191reverse complement

Expression of CNT30208772

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MSTHHILGLKKVPRVQRVFPTQFLLEISFRIDIPSS

Sequence

>CNT30208772
TTTTTGTTATTCCACTATAGCTTCGCAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACCACT
CTTTCTTCTAAGGATGCCTAACCGCCGCACCGATCATTCGGGGGGGGGGGGGGGCGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTA
AAGAGTAACGGAGGTGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACCGACTGGTCGAACAG
AGACGAAAGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAACAGGCTGATGACTCCCAAG
AGCTCTTATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCAACGTGTATTTCCCACCCAGTT
TCTTTTGGAAATTTCTTTCAGGATAGATATTCCATCCAGTT