Detailed information on CNT30208050


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 4e-33

BLAST vs NONCODE:
NONTPRT002187, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30490123Helianthus annuusOlea europaea38.1154.3995.46947forward
CNT30216578Helianthus annuusKalanchoe fedtschenkoi57.4242.8495.521427forward
CNT30571858Helianthus annuusVitis vinifera55.0139.4496.711367reverse complement

Expression of CNT30208050

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MKLRSSVKCSFLFRQVSFSFLDDGKTSKLRIESLPSSLLEKGLSLYTKTLSKGAELEERSELP*

>peptide 2 (47 aa)
MPGSGSAHLLTPFEALSSVRFSFRMSRSASRVYKPFSFQCSPFESGL*

>peptide 3 (45 aa)
MSNEKSGEKHDRLPVEGFLRSANLRRVNRSLRNPRKGCRPMGTRK*

>peptide 4 (41 aa)
MHWMDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG*

>peptide 5 (30 aa)
MMSMARGRALNGLGWPHFALPTPRKLRIQA*

Sequence

>CNT30208050
ATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGATCTCCGATCGGG
AAACCGTATCCAAGCTCCGTGGCTAGTCTGCGCTCCTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACCAAG
ACCCCGTTAATAGTGGCGAGCGAGCGGATTGGGGCTTTGAAGAAAAAACAAAGATGAAGCTTCGTTCCTCAGTAAAGTGTTCATTTCTTTTTCGGCAGGT
TTCATTCTCTTTCTTGGATGATGGAAAAACCAGCAAACTACGGATTGAAAGCTTACCTTCTTCTCTTCTGGAGAAAGGGCTTTCTTTATATACGAAGACG
TTGAGTAAGGGGGCGGAGCTTGAAGAGCGAAGCGAGTTGCCCTAGCCTATTACGTTTTTCAGCAGCAAGCTACGGTCTAACGCTTGCCTTCGGTGGCTAA
CCTAGGTTGAGCTGAAAACTCCAAAACTAGTGCCTCCGGTGGCTAACCTAGGTTGAGCTGAAAACTCCAAAGCTAGTGCCTCCGGTGGCTAACCTAGGTT
GAGCTGAAAACTCCAAAACTAGGGTTCCAAACCTATCTCTAATAATCAGGTAAGCTTTCAAGCTCCTTGACTTTCTATTAGTTTAGTCAAGGGCGCTGTG
AACTGTAATTGTGAAAAAGTTGGAAGATCTGGCCAAAGAAGGTGATAGCCCTGTAGATTCGTTCCCATTGTTCGATCCTTCCCAGTAAAATGCGGCGTGT
TCGAATTCTGATCGCTTTTACGCGAGAAAGGGGGACCACCCTCTAAGCCTAAGTATTCCACAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGA
AAAGAACCCTATTTAGGGAGTGTAATAGAGAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCTTAGAGCCTTGACTTTTTATATTAGTCA
AGCGCACTCACTCTAACGGCGTACCTTTTGCATGATGGGTCAGCAAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGA
ATCTTCTAGTTCTTCCCATTTGACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGT
GGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCCAACCAAGATCGGATTTAGTTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGT
CGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTGGCCCCATTTCGCCTTACCAACCCCAAGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAGA
CAGACTTTTTGGGTGCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATTGA
GCGATGAAAACCAGGAGGTGGGCTTGGAAGCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTAGTCTAGCTCCATGGCACCAAAAATGTATCAGGGCT
CAAGTGATTCACCGAAGTGACGAGACCTTGAAAGCAGCTTTTTCAAGTGTCAGTAGCGGAACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCT
GGAGATATCAGAAGTGAGAATGCTGACATGAGTAACGAGAAATCCGGTGAAAAACACGATCGCCTGCCAGTGGAAGGTTTTCTACGTTCAGCCAATCTAC
GCAGAGTGAATCGGTCCCTAAGGAACCCCCGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACAGAACCATGCCTGTCTG
TTGGAGCGAATTGGATGATCGGGCCGAGGGCTGCCCCCTCTTCCCCTCACTCTCCTTTCCCTTAATATGAACCTTGAGTCATCAAAGCCTTTCTGACTCG
GCCTGGCCCGGTCGCCCTACGCGACTGGCGCTTCAAAAGGCGAAACTCTCGTCGTAGTTTGGCGACCTAAGGGGCGGACACTTTTTGTTATAAAGGTGAA
GACTCGGAAGTGGGCGAACACTTGGCCCAGCGGGCGAACATGCCGGGCTCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCTAGTGTGCGCT
TTAGTTTTCGAATGTCTCGTTCAGCGTCACGAGTCTACAAGCCTTTCTCATTTCAGTGCTCGCCCTTTGAATCGGGCCTTTAGTCTTTTGATTAGAGTAG
GGGTCGCGAGAGAGCAGAGCGTACCGCCCTGCCATAGTCGCGAGTCTGTTTATAGTCGCGACTGTTGTCATAGTCAACAAGGTTGAAACTTCCAGGAAAA
AACTTCGAATTGGGAGGCCGATCCTCCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCG