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Detailed information on CNT30207763


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730494Helianthus annuusCorchorus capsularis83.688.0799.23775forward
CNT30396824Helianthus annuusTriticum turgidum75.5169.5193.29700reverse complement
CNT30569398Helianthus annuusActinidia chinensis63.7530.2598.98591forward
CNT30657980Helianthus annuusTriticum dicoccoides43.3798.5395.02402reverse complement
CNT30688674Helianthus annuusTriticum urartu81.6657.4894.45757forward
CNT30347837Helianthus annuusEragrostis tef59.9872.1192.81556reverse complement
CNT30620564Helianthus annuusCajanus cajan72.61398.37673reverse complement
CNT30642274Helianthus annuusCannabis sativa84.0395.3593.71779reverse complement
CNT3036965Helianthus annuusCucumis melo69.1588.0599.22641forward
CNT30604015Helianthus annuusOryza punctata54.48104.5591.88505reverse complement

Expression of CNT30207763

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWCTSYRAHGKRWVAKCGADNC*

Sequence

>CNT30207763
AAGACAAAAGCACACTTTTTCCAACATTAGTACTAAAAAAGGGTTAGTTTTATGCCACAATTGATGTAATTTATATGTTGCGTTTTGTGCACATCAAATA
CCCCCACACTTAAATCTTTGCTTGTCCTCAAGCAAAACTCTTTATAATATACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCT
CCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCGGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCG
TCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCT
TCCCCAAGAGCTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCAT
TAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGA
GGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCCACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGAAAGCATCTAAGTA
GTAAGCCCACCCCAAGATGAGTGCTCTCCTATTCCAACTTCCCCAGAGCCTCCGGTAGCACAGCCGAGACAGCGACGGGTTCTCTGCCCCTGCGGGGATG
GAGCGACAGAAGTTTTGAGAATTCAAGAGAAGGTCACGGCGAGACGAGCCGTTTATCATTACGATAGGTGTCAAGTGGAAGTGCAGTGATGTATGCAGCT
GAGGCATCCTAACAGACCGGTAGACTT