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Detailed information on CNT30207637


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTPRT002187, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Helianthus annuusOryza sativa24.5910095.43481forward
CNT30671914Helianthus annuusSetaria viridis4148.2394.64802forward
CNT30524649Helianthus annuusSetaria italica54.8632.5593.571073forward
CNT30550219Helianthus annuusIpomoea triloba70.531.7697.11379forward
CNT30378673Helianthus annuusArabidopsis thaliana19.4330.4796.05380reverse complement
CNT30619000Helianthus annuusSesamum indicum71.0145.4795.91389forward
CNT30730372Helianthus annuusCorchorus capsularis72.0972.8795.671410forward
CNT30632407Helianthus annuusVigna unguiculata69.6350.4396.041362reverse complement
CNT30505430Helianthus annuusNicotiana attenuata70.5558.897.541380forward
CNT30712870Helianthus annuusGlycine max38.0944.8396.64745forward
CNT30157615Helianthus annuusPistacia vera23.6262.9495.45462forward
CNT3092080Helianthus annuusSolanum tuberosum17.1857.6395.24336forward
CNT30185187Helianthus annuusSecale cereale54.5530.1794.191067forward
CNT30300122Helianthus annuusTriticum aestivum54.5549.4794.191067forward
CNT30221907Helianthus annuusHordeum vulgare47.9678.195.42938forward
CNT30394721Helianthus annuusTriticum turgidum54.4529.0794.271065forward
CNT30569655Helianthus annuusActinidia chinensis51.7928.4594.571013forward
CNT30592527Helianthus annuusMusa acuminata9.6656.5997.35189forward
CNT30543268Helianthus annuusBrassica napus47.5540.5296.56930forward
CNT30234026Helianthus annuusBrassica oleracea19.1294.2193.85374reverse complement
CNT30511493Helianthus annuusSolanum lycopersicum15.4933.8997.69303reverse complement
CNT30555751Helianthus annuusOryza glaberrima12.4234.0893.83243reverse complement
CNT30147391Helianthus annuusMedicago truncatula55.0142.5396.381076reverse complement
CNT30435868Helianthus annuusAegilops tauschii43.460.996.11849forward
CNT30258698Helianthus annuusAvena sativa21.2751.4996.15416reverse complement
CNT30670388Helianthus annuusTriticum dicoccoides54.5538.0594.11067forward
CNT3082633Helianthus annuusBrassica juncea16.195.7495.24315forward
CNT30140120Helianthus annuusLolium perenne54.5532.1394.381067forward
CNT3017954Helianthus annuusZea mays54.8128.2993.841072forward
CNT30605266Helianthus annuusGossypium raimondii41.9739.2397.08821forward
CNT30655407Helianthus annuusRosa chinensis70.4541.2296.521378forward
CNT30628241Helianthus annuusDaucus carota68.5649.6797.841341reverse complement
CNT30689137Helianthus annuusTriticum urartu45.1473.495.47883forward
CNT30721631Helianthus annuusTriticum spelta50.6628.5395.56991forward
CNT30346086Helianthus annuusEragrostis tef11.0928.6394.47217forward
CNT30595572Helianthus annuusOryza meridionalis13.9131.7494.85272forward
CNT30359134Helianthus annuusLactuca sativa100.273.697.61960forward
CNT30434643Helianthus annuusPapaver somniferum38.39100.9493.21751forward
CNT3057903Helianthus annuusAmborella trichopoda60.024991.651174reverse complement
CNT30108930Helianthus annuusOryza longistaminata44.4337.1496.32869forward
CNT3038420Helianthus annuusCucumis melo49.968.3595.29976forward
CNT30331546Helianthus annuusDioscorea rotundata13.3462.5991.95261reverse complement
CNT30499372Helianthus annuusDigitaria exilis54.8131.5493.561072forward
CNT30603680Helianthus annuusOryza punctata54.5527.0394.281067forward
CNT30550626Helianthus annuusOryza brachyantha15.44103.0789.74302reverse complement
CNT30113381Helianthus annuusFicus carica22.810095.29446reverse complement

Expression of CNT30207637

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MPGSGSAHLLTPFEALSSVRFSFRMSRSASRVYKPFSFQCSPFESGL*

>peptide 2 (46 aa)
MHWMDARALRRKDAFRGERPWGDTVCDPWISDRETVSKLRGYFQAP*

>peptide 3 (45 aa)
MSNEKSGEKHDRLPVEGFLRSANLRRVNRSLRNPRKGCRPMGTRK*

>peptide 4 (30 aa)
MMSMARGRALNGLGWPHFALPTPRKLRIQA*

Sequence

>CNT30207637
ATGCATTGGATGGATGCCCGGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGATCTCCGATCGGG
AAACCGTATCCAAGCTCCGTGGCTACTTTCAAGCTCCTTGACTTTCTATTAGTTTAGTCAAGGGCGCTGTGAACTGTAATTGTGAAAAAGTTGGAAGATC
TGGCCAAAGAAGGTGATAGCCCTGTAGATTCGTTCCCATTGTTCGATCCTTCCCAGTAAAATGCGGCGTGTTCGAATTCTGATCGCTTTTACGCGAGAAA
GGGGGACCACCCTCTAAGCCTAAGTATTCCACAATGACCGATAGCGTACAAGTACCGTGAGGGAAAGGTGAAAAGAACCCTATTTAGGGAGTGTAATAGA
GAACCTGAGATCCGATGCGAACAATCAGTCGAAGGAGCGGAGCTTAGAGCCTTGACTTTTTATATTAGTCAAGCGCACTCACTCTAACGGCGTACCTTTT
GCATGATGGGTCAGCAAGGAAATGGGAACAGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAATCTTCTAGTTCTTCCCATTTGACCCGAA
ACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAG
GGGTGAAAGGCCAACCAAGATCGGATTTAGTTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGGG
CTAGGGTGGCCCCATTTCGCCTTACCAACCCCAAGGAAACTCCGAATACAGGCCTAGATCGTTTGTACAGACAGACTTTTTGGGTGCTAAGATCCAAAGT
CGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAATCACTTAGTGGAAAAGGAAGTGATTGAGCGATGAAAACCAGGAGGTGGGCTTGGAA
GCAGCCATCCTTTGAAGAAAGCGTAATAGCTCACTAGTCTAGCTCCATGGCACCAAAAATGTATCAGGGCTCAAGTGATTCACCGAAGTGACGAGACCTT
GAAAGCAGCTTTTTCAAGTGTCAGTAGCGGAACGTTCTGTCAATCGGGGAAGGTTTTTGGTGACAAGACCTGGAGATATCAGAAGTGAGAATGCTGACAT
GAGTAACGAGAAATCCGGTGAAAAACACGATCGCCTGCCAGTGGAAGGTTTTCTACGTTCAGCCAATCTACGCAGAGTGAATCGGTCCCTAAGGAACCCC
CGAAAGGGCTGCCGTCCGATGGGTACACGAAAGTGACGAAGTTGCTTTGACTACAGAACCATGCCTGTCTGTTGGAGCGAATTGGATGATCGGGCCGAGG
GCTGCCCCCTCTTCCCCTCACTCTCCTTTCCCTTAATATGAACCTTGAGTCATCAAAGCCTTTCTGACTCGGCCTGGCCCGGTCGCCCTACGCGACTGGC
GCTTCAAAAGGCGAAACTCTCGTCGTAGTTTGGCGACCTAAGGGGCGGACACTTTTTGTTATAAAGGTGAAGACTCGGAAGTGGGCGAACACTTGGCCCA
GCGGGCGAACATGCCGGGCTCCGGCTCCGCGCACCTGCTGACACCTTTCGAAGCACTTTCTAGTGTGCGCTTTAGTTTTCGAATGTCTCGTTCAGCGTCA
CGAGTCTACAAGCCTTTCTCATTTCAGTGCTCGCCCTTTGAATCGGGCCTTTAGTCTTTTGATTAGAGTAGGGGTCGCGAGAGAGCAGAGCGTACCGCCC
TGCCATAGTCGCGAGTCTGTTTATAGTCGCGACTGTTGTCATAGTCAACAAGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGCCGATCCTCCCG
GTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCG