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Detailed information on CNT30207585


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226708Helianthus annuusHordeum vulgare98.2725.4991.5341forward
CNT30687569Helianthus annuusTriticum urartu98.2716.7691.5341forward
CNT30431658Helianthus annuusPapaver somniferum37.468.1988.46130forward

Expression of CNT30207585

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKGRFALDALYPPHNDGSVVLGRVEACFFSRVF

>peptide 2 (35 aa)
ALSFAILKKVSQGPIIITAFSTIEFGLRGQPDGFY*

Sequence

>CNT30207585
GGCCCTTTCTTTTGCAATACTTAAAAAAGTCTCTCAAGGCCCAATTATTATTACAGCGTTCTCTACCATAGAATTCGGCCTTCGGGGTCAACCCGACGGC
TTCTATTAGGAAGGCGGCGCAAAGGAGGCTCGAGGGCTTGTTAAGGAAGGCGGCAAGGGCCGACGAAGGGGGGAAAACGAAAGACCTTTTCTGGTCCCCC
TGAGCCGGGGGTGCTTGCGGGAGGGGTGTACCACGACGAAACAAGGGAATGAAAGGCCGCTTTGCGTTGGATGCTCTTTACCCTCCCCACAATGATGGCT
CTGTTGTCTTGGGGAGGGTTGAAGCTTGCTTCTTCTCCAGAGTCTTC