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Detailed information on CNT30207458


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694844Helianthus annuusOryza sativa14.3921.8693.7580forward
CNT30317675Helianthus annuusCorylus avellana13.8528.6293.5177forward
CNT30191267Helianthus annuusSecale cereale14.3923.539580forward
CNT30224947Helianthus annuusHordeum vulgare13.8526.1993.5177forward
CNT30395161Helianthus annuusTriticum turgidum13.8521.6393.5177forward
CNT30137004Helianthus annuusLolium perenne13.8532.9193.5177forward
CNT3067939Helianthus annuusLeersia perrieri11.6922.5795.3865reverse complement
CNT30652446Helianthus annuusRosa chinensis14.5726.2110081forward
CNT30721855Helianthus annuusTriticum spelta13.8520.2693.5177forward

Expression of CNT30207458

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVLHIWFGFFLFVVCGCYDFMYLSPVMVLQI*

>peptide 2 (37 aa)
MLWFCIFGLVFSCLLFVGAMILCIYRLLWSCKFRSRI*

Sequence

>CNT30207458
GGCCCACTAAGCATTAGGGTTCGCTAAATAACCCCCACAACATCCATAACATCCTGATCTCTTCACAATCTATCAGCGTCGGCTGCTAGGGTTCCATAAC
CTAACCAGAAAAGTCACAACTTTCGGTTTCCGATCACCATGAGGGCCAAGTGGAAGAAGAAGAGAATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAG
GCAGAGATCTAAGTAATCTGTTTATCGGGAATAATATGGTACCAGTAATCGTCAGTTTATGTTTTGTGTTTTCTGTTTGAAGTATGATGTTTGAACTTAT
CGTAACGTTGTAGGTTTTTTGTTGGATTGAGTTTTATGACTTTTATGATATGAATTTAGCTTAAAATGTTATGGTTCTGCATATTTGGTTTGGTTTTTTC
TTGTTTGTTGTTTGTGGGTGCTATGATTTTATGTATTTATCGCCTGTTATGGTCTTGCAAATTTAGATCGAGAATCTAAATTTTGGATTTGTGGCAAAGA
TTAATAAGGGATATGTTTTCTGTTTAAATTTGTGCAACCAGTGGTGTCACTGGTCG