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Detailed information on CNT30207127


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30232496Helianthus annuusAnanas comosus91.6446.2186.5274forward
CNT30707780Helianthus annuusPrunus avium35.1211.3384.76105forward
CNT30578211Helianthus annuusOryza barthii22.0710.7892.4266forward

Expression of CNT30207127

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MVKRPSMIIDHRNEIKRYFNPYQLDLVAPGNKHA*

Sequence

>CNT30207127
GAATAACTGAAAACTAATATACAAGCAAGGATTGAATGCGCCCCTCTACCATATCTGTACAAATAGAATAGCCTATTTATACAGAATGGTAAAGAGGCCG
TCTATGATCATCGATCATAGAAATGAAATAAAGAGATATTTTAATCCTTACCAACTCGATCTTGTCGCCCCTGGCAACAAACATGCATGAACCATTTCAC
GAAGTATGTGTCCGGATAGTCCAAAGTCTCGGTAGTTAGCTCTTGGCCTTCCAGTTGAAAAACAACGTCGATGAAGCCGCGTAGGTGCACTATTCCGCG