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Detailed information on CNT30207105


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30336357Helianthus annuusCynara cardunculus16.0932.2286.67135reverse complement

Expression of CNT30207105

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MFQVICVIQEKCSKALSSSEKWLSEPQLQG*

>peptide 2 (33 aa)
MNVVGHNLHLMRFQKGKKKATNERLDMAGVKDM*

>peptide 3 (50 aa)
MYSSLFDKGNIRFRSWEPKDDWQKEKMDFIQGVSRISTLPRTNVKESSKL*

>peptide 4 (38 aa)
MELMQVADKATIDKRLKLMLRFLGLSMMLDNMLDKDVD*

>peptide 5 (43 aa)
MKVRIEVGKNQCIQVCLTRATFDSGVGSLRMTGRRRKWTLFKA*

>peptide 6 (29 aa)
MKKVASNVVKKRVFELFAPFNGICSLLLL*

Sequence

>CNT30207105
ATGTTTCAGGTGATCTGTGTGATCCAGGAAAAGTGCAGTAAAGCACTATCAAGCTCAGAGAAGTGGCTCAGTGAACCCCAGCTACAAGGATGAAGAAGGT
GGCGAGTAATGTAGTGAAGAAACGAGTCTTTGAATTGTTTGCACCTTTCAATGGCATATGTAGTCTGCTGCTGCTTTAGCTGTTGAATTATGCATATGGA
GTGTAGTTGCTGATTTTTACAGAAGGTCGTCTGAGCCGTACAATGAATGTGGTAGGTCACAACCTACATCTGATGCGCTTTCAAAAGGGAAAGAAAAAGG
CGACGAATGAACGCCTAGATATGGCTGGTGTAAAGGACATGTAAAATTGATATTGTTGGAAGATCCTGCTAGCAAAGAGAGAAATCTTATTGGCAATAAA
TAAGAATGCTAATGTACAAGCGTTTAATGTAGTTATGAAAGTGAGAATCGAAGTGGGTAAAAATCAATGTATTCAAGTTTGTTTGACAAGGGCAACATTC
GATTCAGGAGTTGGGAGCCTAAGGATGACTGGCAGAAGGAGAAAATGGACTTTATTCAAGGCGTGAGCCGCATTTCGACATTACCAAGGACCAATGTAAA
AGAGTCAAGCAAGCTTTAGAGCTAGAAGTTTAGGATAAGTGTAAATATCTAGCTCTCATGTTTTAATAGGTTCGTCTAGCATGGAGCTTATGCAAGTAGC
TGATAAGGCAACCATAGATAAAAGGTTGAAGCTTATGTTGAGGTTTTTAGGACTCTCAATGATGCTAGACAACATGTTAGACAAAGATGTTGATTGAGTA
TATCAAGCCCTTACTTGATTTTTGTGATCAAGTGTTATT