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Detailed information on CNT30206724


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 2e-58

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Helianthus annuusOryza sativa45.1638.2896.02980forward
CNT30676981Helianthus annuusSetaria viridis26.4191.3990.75573forward
CNT30536068Helianthus annuusEucalyptus grandis67.9342.896.471474reverse complement
CNT30513456Helianthus annuusJuglans regia68.0246.597.491476forward
CNT30500477Helianthus annuusCoffea canephora66.8779.6898.351451forward
CNT30730500Helianthus annuusCorchorus capsularis50.5192.3398.911096forward
CNT30630109Helianthus annuusVigna unguiculata68.4847.1496.571486forward
CNT30196858Helianthus annuusPisum sativum68.0279.4894.721476forward
CNT3090649Helianthus annuusSolanum tuberosum67.8353.8498.851472forward
CNT30291213Helianthus annuusTriticum aestivum68.2542.6395.481481forward
CNT30225309Helianthus annuusHordeum vulgare39.5971.2991.62859forward
CNT30400299Helianthus annuusTriticum turgidum45.1645.9495.92980forward
CNT30310298Helianthus annuusCamelina sativa44.6563.5498.25969reverse complement
CNT30460907Helianthus annuusSaccharum spontaneum68.2544.4595.541481forward
CNT30136065Helianthus annuusLolium perenne25.1284.8994.68545forward
CNT303731Helianthus annuusZea mays68.4865.9994.821486forward
CNT30655263Helianthus annuusRosa chinensis67.7981.594.361471forward
CNT30688464Helianthus annuusTriticum urartu68.2580.4995.611481forward
CNT30596725Helianthus annuusOryza meridionalis68.2942.9495.551482forward
CNT30154922Helianthus annuusPrunus persica67.7987.0994.631471reverse complement
CNT30319706Helianthus annuusAsparagus officinalis67.7451.1598.161470forward
CNT30332807Helianthus annuusDioscorea rotundata63.1382.9398.031370reverse complement
CNT30148090Helianthus annuusBrachypodium distachyon63.4147.3795.711376reverse complement
CNT30103033Helianthus annuusOryza rufipogon68.4395.7493.871485reverse complement
CNT30585638Helianthus annuusEchinochloa crusgalli26.4537.0895.64574reverse complement

Expression of CNT30206724

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP*

>peptide 2 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 3 (56 aa)
MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGVRAISEIPLWKS*

>peptide 4 (59 aa)
MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYDLKITGVKVGQ*

Sequence

>CNT30206724
CGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCGAATAGGTTAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGA
CAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAA
AACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCAGTAGAATGCTGCACCCTAGATGGCGAAAGTCCAGTAGCCGAAAGCATCACT
AGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCG
AAGTAGTACCGTGAGGGAAGGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCGGGGCTCT
GACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCAA
TTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAA
TCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCT
AGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCTCAAAATAACAGGGGTCAAGGTC
GGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTA
GGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGG
GGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATACATCGGTAGGGGAGCGTTCCGCCTTAGAGTGAAGCACCCGCGCGAGCGGTAGTGGACGAAGC
GGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAG
TCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTTGGTCCCGAGGGACGGAGGAGGCTAGGTT
AGCCGAAAGATGGTTATCGGTTCAAGGACGTAAGGTGACCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTA
AGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACAC
AGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGACCTGATGACAGGGGAGCCGGCGAC
CGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGG
GCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCT
GGGATTGGCTTTGGGCCTTTCCTGCGCAGCTTAGGTGGAAGGCGAAGAAGGCCTCCTTCCGGGGGGGTCCGAGCCATCAGTGAGATACCACTCTGGAAGA
GCTAGAATTCTAACCTTGTGTCAGGACGTACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGT
GCAAAGGTTTCCTCGGGCCGGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGCTGCTCGA