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Detailed information on CNT30206551


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 2e-132

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730524Helianthus annuusCorchorus capsularis10072.296.9548forward
CNT30505772Helianthus annuusNicotiana attenuata86.1399.3796.19472forward
CNT30147369Helianthus annuusMedicago truncatula10070.0898.36548forward
CNT3077091Helianthus annuusBrassica juncea10074.4697.63548forward
CNT30265842Helianthus annuusBrassica rapa10095.1497.45548forward
CNT30628171Helianthus annuusDaucus carota10054.4798.72548forward
CNT30368933Helianthus annuusSorghum bicolor100.1843.596.72549forward
CNT30117075Helianthus annuusOryza nivara100.1844.5396.54549forward

Expression of CNT30206551

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MKFQRFPGPVGQGYILVEYISVARVRPRTSKGITDLLLPQTSVA*

Sequence

>CNT30206551
GGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTTAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA
GATTTCCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT
GCCTCAAACTTCCGTGGCCTAAAAGGCCATAGTCCCTCTAAGAAGCTGGCCATGGAGGGATACCTCCACATAGCTAGTTAGCAGGCTCCACTCCTGGTGG
TGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAGCGGAGTCCTAAAA
GCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAA
CATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAG