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Detailed information on CNT30206448


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FK62|SAU24_ARATH, E-value = 1e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30337201Helianthus annuusCynara cardunculus44.3555.2880.88204forward

Expression of CNT30206448

Peptides detected in this lncRNA

>peptide 1 (51 aa)
LVRCLQNCCRYRQMYTSQNAPKREARSVNTSSLQGIVSPPIGWLYPNSSSA*

>peptide 2 (34 aa)
MMRGIRMAMFSRKLEAAHLQKLLNDDKNRSSASW*

Sequence

>CNT30206448
CTGGTTAGATGTTTACAAAACTGTTGTAGATATAGACAGATGTATACAAGTCAAAATGCTCCCAAACGAGAAGCCAGATCTGTGAATACATCTTCACTAC
AGGGAATCGTGAGCCCGCCCATTGGATGGTTGTACCCAAACTCTTCTTCTGCCTGATGCAGTAGCTCCTGAAAGGTAGGTTCGCTTAGTAGTGATACAGA
CACCACAAACCGCTTCTTCTCTTGTTCTCCAACATAAATGGCAAAATAGCCTTTGGGGATGTCCATAGATGCAGGAGTGGTGCTACCATTAGAGAGGGAC
CGTTTGAGAATTTTTCTTGCTTGAATGATGCGTGGCATACGTATGGCCATGTTTTCAAGGAAGCTAGAGGCTGCTCACTTACAAAAGTTGTTGAATGATG
ATAAGAATCGAAGTAGCGCTTCCTGGTGAAAGATATGATGTTGTAGATGAGTTTTGATGT