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Detailed information on CNT30206408


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30722532Helianthus annuusTriticum spelta40.4319.3385.71133forward
CNT30370171Helianthus annuusOryza glumipatula38.9115.0983.59128forward

Expression of CNT30206408

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MAEGGKTDHKEMKTRERDQVDRKLSEVRVQLTGESQAACHTAHGCRDQVVQVT

>peptide 2 (32 aa)
VEFPINVEAIFSPVGGMSQTLDLTLFGIHSTK*

Sequence

>CNT30206408
GTCGAGTTTCCAATAAACGTGGAAGCCATTTTCAGCCCGGTTGGTGGGATGTCACAAACGCTTGATTTAACGTTGTTTGGTATCCACTCGACAAAGTAAG
ACGAGTTCTTGTTTTGAACATTCATCATTTGTTCGTCAACTTCTTTGGTGCTCATCTTGCCTCGGAACATGGCTGAGGGGGGCAAAACCGACCATAAAGA
AATGAAGACGAGGGAAAGGGATCAGGTTGACCGCAAGCTTTCGGAGGTCAGAGTTCAATTGACCGGGGAATCTCAAGCAGCATGTCACACCGCTCATGGT
TGCAGAGATCAAGTGGTTCAGGTCACCAA