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Detailed information on CNT30206293


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 2e-58

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677083Helianthus annuusSetaria viridis19.1658.893.35421forward
CNT30524664Helianthus annuusSetaria italica41.6966.9195.31916forward
CNT30639555Helianthus annuusNymphaea colorata64.9183.4997.481426forward
CNT30378667Helianthus annuusArabidopsis thaliana13.1125.7499.31288forward
CNT30616920Helianthus annuusSesamum indicum23.8553.6390.84524reverse complement
CNT30503447Helianthus annuusNicotiana attenuata49.9365.57991097reverse complement
CNT30711335Helianthus annuusGlycine max16.8994.6495.42371reverse complement
CNT3044711Helianthus annuusPrunus dulcis21.7110099.37477reverse complement
CNT30638683Helianthus annuusCapsicum annuum23.4499.8194.17515reverse complement
CNT30193801Helianthus annuusSecale cereale57.0888.8195.371254forward
CNT30588765Helianthus annuusMusa acuminata27.2685.8296.83599reverse complement
CNT3088853Helianthus annuusVigna radiata12.1565.9398.88267reverse complement
CNT30511396Helianthus annuusSolanum lycopersicum27.5466.1294.71605forward
CNT30441975Helianthus annuusAegilops tauschii28.0477.2995.62616forward
CNT30248027Helianthus annuusAvena sativa42.696.194.02936reverse complement
CNT30664460Helianthus annuusTriticum dicoccoides16.4399.7297.23361forward
CNT3062651Helianthus annuusArabidopsis lyrata31.1382.2198.39684reverse complement
CNT30126841Helianthus annuusCorymbia citriodora15.792.7496.52345forward
CNT30720907Helianthus annuusTriticum spelta46.47100951021reverse complement
CNT30364730Helianthus annuusSorghum bicolor18.0269.8493.69396reverse complement
CNT30357533Helianthus annuusLactuca sativa19.2541.5598.82423forward
CNT30410430Helianthus annuusPapaver somniferum62.8647.7497.971381reverse complement
CNT30646402Helianthus annuusCannabis sativa49.5286.0193.21088reverse complement
CNT30576679Helianthus annuusOryza barthii15.263.6295.51334forward

Expression of CNT30206293

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYDLKITGVKVGQ*

>peptide 2 (56 aa)
MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGVRAISEIPLWKS*

>peptide 3 (44 aa)
MGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP*

>peptide 4 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

Sequence

>CNT30206293
CGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCGAATAGGTTAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGA
CAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAA
AACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCAGTAGAATGCTGCACCCTAGATGGCGAAAGTCCAGTAGCCGAAAGCATCACT
AGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCG
AAGTAGTACCGTGAGGGAAGGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGCAGTGGGAGGAGCCCGGGGCTCT
GACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAGGGCAA
TTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAA
TCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCT
AGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCTCAAAATAACAGGGGTCAAGGTC
GGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTA
GGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGG
GGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATACATCGGTAGGGGAGCGTTCCGCCTTAGAGTGAAGCACCCGCGCGAGCGGTAGTGGACGAAGC
GGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAG
TCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTTGGTCCCGAGGGACGGAGGAGGCTAGGTT
AGCCGAAAGATGGTTATCGGTTCAAGGACGTAAGGTGACCCTGCTTTTTCAGGGTAAGAAGGGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTA
GAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGGGGTCGCAG
TGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGG
AAGTTGGTGACCTGATGACAGGGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTA
AGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTG
GACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGATTGGCTTTGGGCCTTTCCTGCGCAGCTTAGGTGGAAGGCGAAGAAGGCCTCCTTCCGGGGGG
GTCCGAGCCATCAGTGAGATACCACTCTGGAAGAGCTAGAATTCTAACCTTGTGTCAGGACGTACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTAT
GGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCGGACGGAGATTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGC