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Detailed information on CNT30206222


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONVVIT000851, E-value = 7e-74

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30668159Helianthus annuusTriticum dicoccoides77.6470.0391.2500forward
CNT30604668Helianthus annuusOryza punctata62.4291.5791.54402forward

Expression of CNT30206222

Peptides detected in this lncRNA

>peptide 1 (30 aa)
SVKWPLNDRSVIKEVGVQRQPGGLPRSSHP*

Sequence

>CNT30206222
TCAGTTAAATGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTG
CGTAATAGCTCACTGATCGAGCGCTCTTGCACCGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATACATCGATAGGGGAGCGT
TCCGCCTTAGAGTGAAGCACCCGCGCGAGCGGTAGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCC
GAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTGAATATTC
CTGTACTACCCCTTGTTGGTCCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACGTAAGGTGACCCTGCTTTTTCAGGGT
AAGAAGGGGTAGAGAAAATGCCTCGAGCCAATGTTCGAGTACCAGGCGCCATTGTATTTACCAGTGTAAACTGACGTATTTTCCAAAAAGGCTAAGTGCA
GGTACTACGCGTAATAGGCTGGCCACTCCTTAGCATCCGTAGAA