Detailed information on CNT30205883


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691897Helianthus annuusOryza sativa329.7798.6172reverse complement
CNT30272360Helianthus annuusChenopodium quinoa32.448.6298.6373reverse complement
CNT3085938Helianthus annuusVigna radiata327.4598.6172reverse complement
CNT30509389Helianthus annuusSolanum lycopersicum325.5910072forward
CNT30650562Helianthus annuusRosa chinensis3211.2910072forward
CNT30627183Helianthus annuusDaucus carota3212.1498.6172forward
CNT30575942Helianthus annuusOryza barthii3210.5698.6172reverse complement
CNT30726422Helianthus annuusLupinus angustifolius208.2310045forward

Expression of CNT30205883

Peptides detected in this lncRNA

>peptide 1 (32 aa)
CGCSLVVRIPRCGRGDLGSNPSSHISFLLFLN*

>peptide 2 (29 aa)
MFSQTKCGCSLVVRIPRCGRGDLGSNPSSH

Sequence

>CNT30205883
TGTGGCTGTAGTTTAGTGGTAAGAATTCCACGTTGTGGCCGTGGAGACCTGGGCTCGAATCCCAGCAGCCACATCTCATTTTTACTTTTTCTGAACTGAT
GCTGTGGTTCTTTTTCAAATAAAAGATGAAAATATGTTTTCTCAAACAAAATGTGGCTGTAGTTTAGTGGTAAGAATTCCACGTTGTGGCCGTGGAGACC
TGGGCTCGAATCCCAGCAGCCACAT