Detailed information on CNT30205718


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526965Helianthus annuusEucalyptus grandis32.4360.9390.84131reverse complement
CNT30202037Helianthus annuusPisum sativum38.124.7393.51154forward
CNT30186776Helianthus annuusSecale cereale35.643.5989.58144forward
CNT30560220Helianthus annuusActinidia chinensis89.623.2889.78362forward
CNT30683954Helianthus annuusTriticum urartu37.875.4890.2153forward
CNT30484006Helianthus annuusChara braunii25.7428.6584.62104forward
CNT3051926Helianthus annuusAmborella trichopoda38.6110.9992.31156forward
CNT3024232Helianthus annuusPopulus trichocarpa48.7696.186.8197forward
CNT30585620Helianthus annuusEchinochloa crusgalli38.12390.91154forward

Expression of CNT30205718

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MESATGLSLQRIKLAKGHLTNPATICFDPH*

>peptide 2 (32 aa)
RIDESNDISVPIFASSFPSESNFFLPYSLSSY*

Sequence

>CNT30205718
AGGATCGACGAATCAAATGATATTTCTGTTCCAATTTTTGCCTCTTCTTTTCCCTCTGAATCAAACTTTTTTTTGCCATACTCGTTAAGTTCCTATTAGT
ATCCTTGATACAAGTCGGATCCTAGATGTAGAAATATAAGATAAGAAGGTGGATCTCTTCTTCATCGAAAGAAATGAGATTATCGCGGATACAAAGCATT
CAATGAAAAAATTAACCAAATTTCCCTGATGTAGAGGCAATCAAGAAAGCTGCATAAGTAAATATATAACCTACAGAAAAGTGGGCTAATCCAACCAATC
TTGCTTGTACAATGGAAAGTGCCACCGGTTTATCTCTCCAACGAATCAAATTGGCCAAAGGTCATTTAACCAACCCGGCAACCATATGCTTCGACCCGCA
TTGA