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Detailed information on CNT30205370


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30536082Helianthus annuusEucalyptus grandis47.6352.5382.32311forward
CNT30316024Helianthus annuusCorylus avellana33.3827.0882.57218forward
CNT30549166Helianthus annuusIpomoea triloba44.8743.681.23293forward
CNT30516897Helianthus annuusJuglans regia76.1156.2279.88497forward
CNT30700558Helianthus annuusQuercus lobata35.2285.1983.91230forward
CNT30376158Helianthus annuusArabidopsis thaliana36.2926.5182.28237forward
CNT30267761Helianthus annuusChenopodium quinoa40.7432.683.83266forward
CNT3021333Helianthus annuusCitrullus lanatus18.6820.6186.07122forward
CNT30378927Helianthus annuusManihot esculenta30.1731.8384.77197forward
CNT30506120Helianthus annuusNicotiana attenuata29.2532.6584.29191forward
CNT3091361Helianthus annuusSolanum tuberosum55.949.6680.27365forward
CNT30591924Helianthus annuusMusa acuminata50.8462.2981.33332forward
CNT30508941Helianthus annuusSolanum lycopersicum43.9572.2981.53287forward
CNT30311656Helianthus annuusCamelina sativa51.4560.5480.95336forward
CNT30713436Helianthus annuusMalus domestica golden26.0352.884.71170forward
CNT30625810Helianthus annuusDaucus carota84.3881.2779.31551forward
CNT30687113Helianthus annuusTriticum urartu58.6571.9979.11383forward
CNT30350937Helianthus annuusEragrostis tef45.3353.5382.43296forward
CNT30476941Helianthus annuusArabidopsis halleri36.1429.4681.78236forward
CNT30154740Helianthus annuusPrunus persica48.797.5582.08318forward
CNT30410012Helianthus annuusPapaver somniferum51.4588.4280.65336forward
CNT30574166Helianthus annuusVitis vinifera47.6372.4981.99311forward
CNT30705868Helianthus annuusPrunus avium37.3722.9882.79244forward
CNT3051605Helianthus annuusAmborella trichopoda49.9249.1780.06326forward
CNT30121063Helianthus annuusCitrus clementina33.8446.1485.07221forward
CNT3035160Helianthus annuusCucumis melo60.4978.3778.48395forward
CNT30330867Helianthus annuusDioscorea rotundata41.6537.6281.62272forward
CNT30150463Helianthus annuusBrachypodium distachyon44.8733.3384.3293forward
CNT30497905Helianthus annuusDigitaria exilis47.3234.2281.55309forward

Expression of CNT30205370

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVKWGCRMGRSGCTLGMSGCMLGMSGCRQET*

Sequence

>CNT30205370
GGGCTATATGGACTTGAAGGTGACAGCCTCGGACTGCTAGGGGAATAAGCAAGAGAGGGGCTGTACTTGGCAGATGACGGATTGTAACTTGGTGAGGTTG
GGCTGTAGCTTGGTGAAGTTGGGCTGTAGCTAGGCGAAGTTGGACTGTAGCCAGGAGAAGTCGGGCTGTAAGCAGGTGAGGTGGGGCTGTAGGATGGAGA
GGTGGGGCTGTATGATGGGGAGGTAGGGCTGTAGGATGGTGAAGTGGGGCTGTAGGATGGGGAGGTCGGGCTGTACGCTGGGGATGTCGGGCTGTATGCT
GGGGATGTCGGGCTGTAGGCAGGAGACGTAGGGCTGTAACTAGGTGATGTGGGGCTATAACTAGGTGACGTGGGTGAGTAACTGGGAGATGTGGGGGAGT
AGCTAGGTGAGGTGGGAGAATAGCTGGGAGAAGTCGGGGAGTACGTAGGACTGGTTGGACTATAGCCAGGGGAACTTGGACTATACGTTGGTGATGTAGG
GCTATAACCGGGTGATGTAGGGCTATAGCCAGGAGACGAAGGGCTGTAACCTGGAGAAGAGGGACTGTATCCAGGTGAAGAAGCCGGAGAAAAGCCCATC
CCGCCAACATAAGGTGAAAACTGTGCATCGTTAAACGGTGACAATCTTAGATT