Detailed information on CNT302051


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30311909Zea maysCamelina sativa26.4312.6888.3360forward
CNT30468549Zea maysSaccharum spontaneum33.4833.0496.0576forward
CNT30351629Zea maysEragrostis tef33.4823.1790.7976forward
CNT30367015Zea maysSorghum bicolor45.3718.3697.09103forward
CNT30596757Zea maysOryza meridionalis31.7231.0397.2272forward
CNT30371008Zea maysOryza glumipatula33.4830.7792.1176reverse complement
CNT30107294Zea maysOryza longistaminata33.4827.9492.1176forward
CNT30103405Zea maysOryza rufipogon33.4836.1992.1176reverse complement
CNT30175658Zea maysVigna angularis29.0726.7286.3666forward
CNT30558210Zea maysPanicum hallii35.6839.3292.5981forward

Expression of CNT302051

Peptides detected in this lncRNA

>peptide 1 (74 aa)
LSMRWMRPPKVLMMSDSSWLISAWKANVSVSEAMSRRPSTDARMRAQSASKRLRRRLEEKSTGGGFVVGGCVCVG

Sequence

>CNT302051
CTTGAGCATGCGGTGGATGCGGCCGCCGAAGGTGTTGATGATGAGCGATAGCAGCTGGTTGATCTCCGCCTGGAAGGCGAACGTCTCCGTCTCGGAGGCC
ATGTCGAGACGACCTTCCACGGACGCGAGGATGAGAGCGCAGAGCGCTAGCAAGCGGTTGCGGCGGCGGCTAGAAGAAAAGAGCACTGGAGGAGGGTTTG
TGGTGGGAGGCTGTGTCTGTGTGGGAC