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Detailed information on CNT30205079


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1KXW6|ATPF_HELAN, E-value = 7e-127

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Helianthus annuusOryza sativa75.389.6485.32545forward
CNT30678565Helianthus annuusSetaria viridis2620.4889.89188forward
CNT30535895Helianthus annuusEucalyptus grandis22.6829.691.46164forward
CNT30703171Helianthus annuusQuercus lobata75.524.5888.28546forward
CNT30282912Helianthus annuusChenopodium quinoa77.0451.9689.59557forward
CNT3020344Helianthus annuusCitrullus lanatus27.119.6884.18196forward
CNT30632292Helianthus annuusVigna unguiculata52.0112.5385.37376forward
CNT30505351Helianthus annuusNicotiana attenuata71.5114.8791.3517forward
CNT3095993Helianthus annuusSolanum tuberosum53.259.6286.75385forward
CNT30179302Helianthus annuusSecale cereale22.9625.7890.36166forward
CNT30291829Helianthus annuusTriticum aestivum75.3813.8384.77545forward
CNT30222903Helianthus annuusHordeum vulgare18.1245.9690.84131forward
CNT3086153Helianthus annuusVigna radiata23.5176.9284.71170reverse complement
CNT30541474Helianthus annuusBrassica napus73.5817.3985.9532forward
CNT30511193Helianthus annuusSolanum lycopersicum60.4424.6687.41437forward
CNT30554216Helianthus annuusOryza glaberrima73.8681.985.02534forward
CNT30145240Helianthus annuusMedicago truncatula34.344.688.31248forward
CNT30660677Helianthus annuusTriticum dicoccoides75.3840.8584.77545forward
CNT30598585Helianthus annuusFraxinus excelsior77.3265.5392.49559forward
CNT3017990Helianthus annuusZea mays75.3816.4785.14545forward
CNT30689283Helianthus annuusTriticum urartu51.7314.7483.42374forward
CNT30621081Helianthus annuusCajanus cajan70.8249.0487.89512forward
CNT30409854Helianthus annuusPapaver somniferum81.8889.2989.02592forward
CNT3057337Helianthus annuusAmborella trichopoda28.225.4786.27204forward
CNT30121210Helianthus annuusCitrus clementina80.3614.9290.88581forward
CNT30551824Helianthus annuusOryza brachyantha23.3769.2683.43169forward

Expression of CNT30205079

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MAPSRNSSEFLIVFKILCFRLSNKSLNTPFPKKIKTPSTTLRFIRFVAKISVLNPKLPADGQWPKETKESVTFFI*

>peptide 2 (36 aa)
MPILALIVRKCNSLFKQLFRVPRAPCKACWKTRCRT*

Sequence

>CNT30205079
CCATGAGTATTTCTTAATTCTTTTTTGAAAAAAAAAATAATAATAAATCAAAAATAATGCCTAAACTCTAAACTAAAGTAGAGGGGCTAGTCCGTTATTT
GTTTCATCGCCGCCAATATGCCAATATTGGCACTGATAGTACGTAAATGTAATTCGTTGTTTAAACAACTATTCAGAGTTCCTAGAGCTCCTTGTAAAGC
TTGTTGGAAAACCCGTTGTCGGACTTGATTACTGGCCTTTTGTTGTTCAAAATTTATAGTTTCATTTTTGTAATTTTCTAGTTGTTCCAAAGTCTTATAA
GTTGAATCAATCAAATTCAATTTTTCTCGCTCTATCTCAGAGTATCCATTCACGCGAAACTCATCTGCTTCTATTTCTATTTTCCGTAATCGAGCCCGGG
CTTTTTCCAGCTGTTCGATGGCCCCTTCGCGCAATTCTTCTGAATTTCTAATAGTATTCAAGATTCTCTGTTTTCGATTATCTAATAAATCACTTAACAC
TCCCTTTCCAAAAAAGATCAAGACCCCAAGTACTACACTTAGATTTATTAGATTTGTTGCTAAAATATCGGTATTAAACCCGAAACTCCCGGCGGATGGC
CAGTGGCCCAAAGAAACGAAAGAATCGGTTACATTTTTCATATGATCTCCTCATATAGATAGACTAAAAAATCGAACAGAGTTCTTTTTGTATTACTTTG
TCCTCTTTATATATATATATATA