Detailed information on CNT30205015


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549614Helianthus annuusIpomoea triloba65.1228.9397.38267forward
CNT30619215Helianthus annuusSesamum indicum43.4116.8994.38178forward
CNT30224837Helianthus annuusHordeum vulgare39.5141.3393.21162forward
CNT30436229Helianthus annuusAegilops tauschii81.4653.0292.81334forward
CNT30605231Helianthus annuusGossypium raimondii10010.9697.56410forward
CNT30682609Helianthus annuusTriticum urartu10015.8592.93410forward
CNT30371457Helianthus annuusOryza glumipatula10017.9693.17410forward
CNT30408512Helianthus annuusPapaver somniferum23.911.5784.6998forward

Expression of CNT30205015

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MGSPPPAGSEKVVLKFRSVNNMVIAPASTGSDNKSGNAVTRTDHTNRGDLCIVIPGPRMLKIVVIKLIEPKMDEIPDR*

Sequence

>CNT30205015
ATAAACCATGCCTAGATACCCGAAGACCAGTTTTCCCGAAAAAGTAGAAACGATATGACTTATGATACCGGATCCAGGCAGAATGGGAATATACACCTCT
GGATGACCGAAGAACTGAAAGAGATGCTGGTATAATATGGGGTCTCCCCCTCCAGCGGGATCAGAAAAGGTTGTATTAAAGTTTCGATCGGTTAATAACA
TGGTAATTGCCCCTGCTAGTACCGGAAGTGATAATAAAAGTGGGAATGCTGTCACTAGAACGGACCACACAAATAGGGGTGATCTATGCATAGTCATTCC
AGGTCCACGCATGTTGAAGATAGTTGTTATAAAATTGATAGAACCTAAAATGGATGAAATACCAGATAGATGAGGACTAGAAATTGCTGAATCAACTGCT
CCTCCAGAAT