Detailed information on CNT30204699


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730474Helianthus annuusCorchorus capsularis47.5421.787.41135reverse complement
CNT30632291Helianthus annuusVigna unguiculata52.8215.9484150reverse complement
CNT30609256Helianthus annuusGossypium raimondii29.9322.3790.5985forward
CNT3057113Helianthus annuusAmborella trichopoda30.633.0387.3687reverse complement

Expression of CNT30204699

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MCKSKSGGSLPGVEHKPKKIKEAHLRTRK*

Sequence

>CNT30204699
AATATATCTATTTTATTTCATAAAGGATTCCTATTTTTAAAGAAATCTCTTTTTGTAAGTAGAAGTTTTTTCAAACTCTGAAGGGATAACAAAAAGAAGT
GGTAATGGGAGCATTTGTACTATATGTGCAAATCAAAATCGGGCGGATCTTTACCCGGAGTAGAGCATAAACCTAAAAAGATTAAAGAGGCCCATTTAAG
AACAAGAAAATGACATCGTGATTTGGATTGGATCTCGATGAAACAATCCATCAATGAGAAGTAAATTGGATAAGTTTAATGAAT