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Detailed information on CNT3020367


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 4e-159

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-110

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316435Citrullus lanatusCorylus avellana66.2597.1382.53744forward
CNT30516063Citrullus lanatusJuglans regia78.2788.9781.11879forward
CNT30629116Citrullus lanatusVigna unguiculata76.485.3781.82858forward
CNT3085936Citrullus lanatusVigna radiata77.4740.2281.61870forward

Expression of CNT3020367

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MPSLSWILAFTLSIVSELSTSKVIVLPVKGLHKYLHPTTKSKH*

>peptide 2 (37 aa)
MVSELSTSNVIVFPVNVFTKICIPPRNRSTKCNVDSF*

>peptide 3 (55 aa)
MSSRKSAFHHAIEAPNATSIPFECYNLLESCRLQAAYQQKSTSVGQVECPPYLGS*

>peptide 4 (48 aa)
MECRFLLDIVIGKRSAILKLLTSKDKPLLVGWNALFILNLCLYIVNCV*

>peptide 5 (69 aa)
MWEPPKSHRAGGGQGGGWTLSEYCSQPKSDHPPIVFQQRSVSVDLVESPPCLESSPSHCRLCLSFQLPM*

>peptide 6 (35 aa)
ILFYPQYHIYYLLTKDITSILELEVVFDPLGHHIT*

Sequence

>CNT3020367
ATTCTTTTTTATCCACAATACCATATTTATTATTTACTTACAAAGGATATTACATCCATTTTAGAGTTAGAAGTTGTCTTTGACCCATTGGGCCATCATA
TAACATAATATATAAAGACGCTGAAATAAACGGACGAGTTTTGTTACCACTAAACCAACCAACCAAGAGATGCAAAGAAAGGCACCACAATTCTAGCACC
ATACACCGTCTGTCAACATGTGGGAGCCACCTAAAAGCCACCGCGCAGGCGGAGGACAAGGTGGAGGGTGGACTCTTTCTGAATATTGTAGTCAGCCAAA
GTCCGACCATCCTCCAATTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGTGGAATCCCCTCCTTGTCTTGAATCTTCGCCTTCACATTGTCGATTG
TGTCTGAGCTTTCAACTTCCAATGTGATTGTCTTTCCTGTCAGCGTCTTCACGAAAATCTGCATCCCCCCACGCAGTCGAAGCACCAAATGGAGAGTTGA
TTCCTTTTGGATGTTGTAATCAGCTAAAGTTCTGCCATCTTCAAGTTGTTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATACCCTCTTTGTCT
TGGATCTTGGCTTTCACATTGTCAATGGTGTCTGAACTTTCGACTTCCAATGTGATTGTCTTCCCCGTTAATGTCTTCACGAAAATCTGCATTCCACCAC
GCAATCGAAGCACCAAATGCAACGTCGATTCCTTTTGAATGTTATAATCTGCTAGAGTCCTGCCGTCTTCAAGCTGCTTACCAGCAAAAATCAACCTCTG
TTGGTCAGGTGGAATGCCCTCCTTATCTTGGATCTTAGCTTTCACATTATCAATTGTATCTGAGCTCTCCACTTCCAAGGTGATTGTTTTGCCAGTCAAG
GGTCTTCACAAATATTTGCATCCCACCACGAAGTCTAAGCACTAAATGGAGTGTAGATTCCTTCTGGATATTGTAATCGGCAAGCGTTCGGCCATCCTCA
AGTTGCTTACCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCTTTATCTTGAATCTTTGCCTTTACATTGTCAATTGTGTCTGAGCTTTCCA
CCTCGAGGGTGATTGTTTTGCCA