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Detailed information on CNT3020365


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-118

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525249Citrullus lanatusPhaseolus vulgaris46.0553.9681.97804forward
CNT3097291Citrullus lanatusSolanum tuberosum50.2356.9582.44877forward
CNT30609009Citrullus lanatusGossypium raimondii48.0587.9582.72839forward
CNT30624206Citrullus lanatusDaucus carota51.3280.7281.81896forward
CNT30154607Citrullus lanatusPrunus persica49.4367.5381863forward
CNT3032754Citrullus lanatusTheobroma cacao51.5568.682.33900forward

Expression of CNT3020365

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MSHKSKTNTNYNRFLNKNREKQRSLKKPRINSQKHSSWGKTTRATIKLQLPDQNGKKKQNKDGTTKNDKELNKLYSLNFSLQFVLINHPYYLTS

>peptide 2 (55 aa)
MSSRKSAFHHAIEAPNATSIPFECYNLLESCRLQAAYQQKSTSVGQEGYPPCLGF*

>peptide 3 (69 aa)
MWEPPKSHRAGGGQGGGWTLSEYCSQPKSDHPPIVFQQRSVSVDLVESPPCLESSPSHCRLCLSFQLPM*

>peptide 4 (37 aa)
MVSELSTSNVIVFPVNVFTKICIPPRNRSTKCNVDSF*

>peptide 5 (48 aa)
MECRFLLDIVIGKRSAILKLLTSKDKPLLVGWNALFILNLCLYIVNCV*

>peptide 6 (30 aa)
MVLPVRVFTNICIPPRSLSTKWSVDSFWIL*

Sequence

>CNT3020365
CCAGCCCCTGCTGTTACGAATTGGAGGTAATCGAACAAGGTTTATTCCTGTTTCTTATATAAATATTCTGTTTCTTTCTTTTTCTTAATTCTTAATACCA
TTCTTTTTTATCCACAATACCATATTTATTATTTACTTACAAAGGATATTACATCCATTTTAGAGTTAGAAGTTGTCTTTGACCCATTGGGCCATCATAT
AACATAATATATAAAGACGCTGAAATAAACGGACGAGTTTTGTTACCACTAAACCAACCAACCAAGAGATGCAAAGAAAGGCACCACAATTCTAGCACCA
TACACCGTCTGTCAACATGTGGGAGCCACCTAAAAGCCACCGCGCAGGCGGAGGACAAGGTGGAGGGTGGACTCTTTCTGAATATTGTAGTCAGCCAAAG
TCCGACCATCCTCCAATTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGTGGAATCCCCTCCTTGTCTTGAATCTTCGCCTTCACATTGTCGATTGT
GTCTGAGCTTTCAACTTCCAATGTGATTGTCTTTCCTGTCAGCGTCTTCACGAAAATCTGCATCCCCCCACGCAGTCGAAGCACCAAATGGAGAGTTGAT
TCCTTTTGGATGTTGTAATCAGCTAAAGTTCTGCCATCTTCAAGTTGTTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATACCCTCTTTGTCTT
GGATCTTGGCTTTCACATTGTCAATGGTGTCTGAACTTTCGACTTCCAATGTGATTGTCTTCCCCGTTAATGTCTTCACGAAAATCTGCATTCCACCACG
CAATCGAAGCACCAAATGCAACGTCGATTCCTTTTGAATGTTATAATCTGCTAGAGTCCTGCCGTCTTCAAGCTGCTTACCAGCAAAAATCAACCTCTGT
TGGTCAGGAGGGATACCCTCCTTGTCTTGGATTTTAGCCTTGACATTGTCAATTGTATCAGAACTTTCCACCTCAAGAGTAATGGTTTTGCCAGTAAGGG
TCTTCACAAATATTTGCATCCCACCACGAAGTCTAAGCACTAAATGGAGTGTAGATTCCTTCTGGATATTGTAATCGGCAAGCGTTCGGCCATCCTCAAG
TTGCTTACCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCTTTATCTTGAATCTTTGCCTTTACATTGTCAATTGTGTCTGAGCTTTCCACC
TCGAGGGTGATTGTTTTGCCAGTAAGGGTTTTTATGAAGATTTGCATCTGTTAAGAAACCATTGAGAGTTTGTATTAAAAATAACTGAAACATATGGCCT
CAATAAGATGAAATGATCATAATATAAATAGCTCAAGAACCAAATCCATATACAAGCAGTCCACTCAACATGATGAATTAGAGGACTCATGTACAAGATT
CAAGAATTGAGAGAATTCACTACAAGATTTTAATTAGTCCCGACACAGGATAACAATCCAAGATGAGTCACAAATCGAAAACGAATACAAATTACAATCG
TTTCTTGAATAAAAATAGAGAGAAACAGAGAAGCTTAAAGAAACCCAGAATCAATTCACAAAAACACTCCTCCTGGGGAAAAACAACAAGGGCGACGATT
AAGCTGCAACTCCCAGATCAAAATGGAAAAAAGAAACAGAACAAAGATGGAACGACAAAGAACGACAAAGAATTGAACAAATTATACAGTCTTAACTTCT
CATTACAATTTGTTTTAATCAATCACCCCTATTATCTCACTTCTTG