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Detailed information on CNT30203345


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30249262Helianthus annuusAvena sativa65.767.9192.63217reverse complement

Expression of CNT30203345

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MYPGLVHTARHTLGIGFARSIGPMITHDFCVPLVPQRLLVVLLAHTTVGSSTGVKS*

>peptide 2 (70 aa)
LKVWLSGLRHWFAKSTYKKIVSWVQIPFPPGIASNRGSACRGEYVPGPCTHRPSHPGNRFRPKHRTNDHP*

Sequence

>CNT30203345
TTGAAGGTATGGCTGAGTGGCTTAAGGCATTGGTTTGCTAAATCGACATACAAGAAGATTGTATCATGGGTTCAAATCCCATTTCCTCCTGGAATCGCTA
GTAATCGCGGATCCGCATGCCGCGGTGAATATGTACCCGGGCCTTGTACACACCGCCCGTCACACCCTGGGAATAGGTTTCGCCCGAAGCATCGGACCAA
TGATCACCCATGACTTCTGTGTACCACTAGTGCCACAAAGGCTTTTGGTGGTCTTATTGGCGCATACCACGGTGGGGTCTTCGACTGGGGTGAAGTCGTA
ACAAGGTAGCCGTAGGGGAACCTGTGGCTG