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Detailed information on CNT30203206


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555120Helianthus annuusOryza glaberrima16.334.7593.982reverse complement
CNT30371428Helianthus annuusOryza glumipatula33.426.8890.48168forward
CNT30318666Helianthus annuusAsparagus officinalis85.0948.6998.36428forward

Expression of CNT30203206

Peptides detected in this lncRNA

>peptide 1 (36 aa)
HINCQLVPTCKHTLNHTMNPIKDFKTSATLVFSCHH*

>peptide 2 (31 aa)
MGAGHARSRYLNRKEGDAEGRASDWSEVVTR*

>peptide 3 (30 aa)
MTSSHHAPYALGDTRATMAGTKGRDPARVS*

Sequence

>CNT30203206
CACATAAATTGTCAACTTGTACCAACTTGTAAACACACATTAAATCACACAATGAATCCAATAAAGGATTTCAAGACGAGCGCAACCCTCGTGTTTAGTT
GCCATCATTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGTCATCATGCCCCTTATGCCCTGGGCGACA
CACGTGCTACAATGGCCGGGACAAAGGGTCGCGATCCCGCGAGGGTGAGCTAACTCCAAAAACCCGTCCTCAGTTCGGATTGCAGGCTGCAACTCGCCTG
CATAAAGCCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATCCGTTCCCGGGACTTGTACACACCGCCCGTCACACTATGGGAGCTGGCCA
TGCCCGAAGTCGTTACCTTAACCGCAAGGAGGGGGATGCCGAAGGCAGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGG
CTG