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Detailed information on CNT30203140


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30158473Helianthus annuusPistacia vera9.1927.5298.3360forward
CNT30314095Helianthus annuusCamelina sativa25.7311.295.83168reverse complement

Expression of CNT30203140

Peptides detected in this lncRNA

>peptide 1 (38 aa)
DSTNSTQNRQRNLGRDIVRRSESGKIASVRIVLCNSGT*

>peptide 2 (31 aa)
MKLESLVIVDQHAAVNMYPGPVHTAPVTPWE*

>peptide 3 (33 aa)
MITHDFCVPLVPQRILVVLLAHTTVGSSTGVKS*

Sequence

>CNT30203140
GACTCAACCAATTCAACACAAAACAGACAGAGGAATCTTGGACGTGATATTGTAAGGCGGAGCGAATCCGGAAAGATTGCCTCAGTTCGGATTGTTCTCT
GCAACTCGGGAACATGAAGTTGGAATCGCTAGTAATCGTGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCTGTACACACTGCCCCCGTCACACCC
TGGGAATAGGTTTCGCCCGAAGCGTCGGACCAATGATCACCCATGACTTCTGTGTACCACTAGTGCCACAAAGGATTTTGGTGGTCTTATTGGCGCATAC
CACGGTGGGGTCTTCGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGTGGCTGGATTGAATCCTTCGCGATGGAAATTCCCTTCAAGGTG
CTTGCTTCCACTGGTGGCGGGCGGGCGAAGGGCCCAAAGGACACGTAGCCGGGGGCGAGTCAGAAAATCCAAGAATTCCATTTTCCTTCTTGTTCATCAA
TCGGAAATCAAGACAAACCGGACACTACGGTGAGACGTGAAAACACCCGATCCCATTCCGACCTCGATATGTGGAATCGTCTTGCGCCATATGTACTGAG
ATTGTTCGAGAGACATGGTCCAAGCTCGGTACGAGGATGACTTGTGCCTAGGG