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Detailed information on CNT30203049


BLAST search results

BLAST vs Swiss-Prot:
sp|P93276|M030_ARATH, E-value = 2e-31

BLAST vs NONCODE:
NONORUT000582, E-value = 2e-62

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677703Helianthus annuusSetaria viridis79.9258.9497.16211forward
CNT30505424Helianthus annuusNicotiana attenuata90.1551.0798.74238forward
CNT30184864Helianthus annuusSecale cereale80.336.6197.17212forward
CNT30224696Helianthus annuusHordeum vulgare75.7690.9197.5200forward
CNT30664266Helianthus annuusTriticum dicoccoides79.9266.1497.16211forward
CNT30364089Helianthus annuusSorghum bicolor77.2744.9392.65204forward
CNT30574572Helianthus annuusVitis vinifera90.913.5699.58240forward
CNT30335929Helianthus annuusCynara cardunculus56.8240.6598.67150forward
CNT30725732Helianthus annuusLupinus angustifolius93.1854.5597.15246forward

Expression of CNT30203049

Peptides detected in this lncRNA

>peptide 1 (34 aa)
ALRRKDAFRGERPWGDTVCDPWISDRETVSKLRG*

Sequence

>CNT30203049
GGGCATTGAGAAGGAAGGACGCTTTCAGAGGCGAAAGGCCATGGGGAGATACCGTCTGTGATCCATGGATCTCCGATCGGGAAACCGTATCCAAGCTCCG
TGGCTAGTCTGCGCTCTTTGGACTTTTCAAACTTAGCGAACTGAAACATCTGAGTAGCTAAAGGAAGGGAAATCAACCGAGACCCCGTTAGTAGCGGCGA
GCGAGAGCGGATTGGGGCTTTGAAGAAAAACAAAGACGAAGCTTCGTTCCTCAGCAAAGTGTTC