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Detailed information on CNT3020302


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-137

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3069548Citrullus lanatusQuercus suber49.5883.183.05590forward
CNT30406246Citrullus lanatusBeta vulgaris51.0990.6182.57608forward
CNT30525291Citrullus lanatusPhaseolus vulgaris67.1462.2881.1799forward
CNT3056329Citrullus lanatusAmborella trichopoda7072.1281.75833forward
CNT30120117Citrullus lanatusCitrus clementina55.7197.6482.5663forward

Expression of CNT3020302

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MECRFLLDIVIGKRSAILKLLTSKDKPLLVGWNALFILNLCLYIVNCV*

>peptide 2 (40 aa)
MVSELSTSNVIVLPVKVFTKICIPPRSRRTKCRVDSFWIL*

>peptide 3 (30 aa)
MVLPVNVFTKICIPPRNRSTRCNVDSFWML*

>peptide 4 (30 aa)
MVLPVRVFTNICIPPRSLSTKWSVDSFWIL*

>peptide 5 (75 aa)
MQGRFLLDIVVSKSSTVLKLLTSKNQSLLIRRDTLLVLDFSLDIVNCIRTFHLKSNGFASKGLHKYLHPTTKSKH*

>peptide 6 (70 aa)
MSSRKSAFHHAIGAQGAMLIPSGCCSLLKSYRLPVAYQQISISVGQVGYPLCLGSWLSHCQWCLNFRLPM*

>peptide 7 (60 aa)
MWEPPKSHRAGGGQGGGWTLSEYCSQPKSDHPPIVFQQRSVSVDLVGFPPCLESLPSHCR*

Sequence

>CNT3020302
CCCTGCTGTTACGAATTGGAGGTAATCGAACAAGGTTTATTCCTGTTTCTTATATAAATATTCTGTTTCTTTCTTTTTCTTAATTCTTAATACCATTCTT
TTTTATCCACAATACCATATTTATTATTTACTTACAAAGGATATTACATCCATTTTAGAGTTAGAAGTTGTCTTTGACCCATTGGGCCATCATATAACAT
AATATATAAAGACGCTGAAATAAACGGACGAGTTTTGTTACCACTAAACCAACCAACCAAGAGATGCAAAGAAAGGCACCACAATTCTAGCACCATACAC
CGTCTGTCAACATGTGGGAGCCACCTAAAAGCCACCGCGCAGGCGGAGGACAAGGTGGAGGGTGGACTCTTTCTGAATATTGTAGTCAGCCAAAGTCCGA
CCATCCTCCAATTGTTTTCCAGCAAAGATCAGTCTCTGTTGATCTGGTGGGATTCCCTCCTTGTCTTGAATCTTTGCCTTCACATTGTCGATAGTGTCGG
AGCTTTCTACTTCCAGAGTGATGGTCTTGCCCGTCAATGTCTTCACGAAAATCTGCATTCCACCACGCAATCGGAGCACAAGGTGCAATGTTGATTCCTT
CTGGATGTTGTAGTCTGCTAAAGTCCTACCGTCTTCCAGTTGCTTACCAGCAAATATCAATCTCTGTTGGTCAGGTGGGATACCCTCTTTGTCTTGGATC
TTGGCTTTCACATTGTCAATGGTGTCTGAACTTTCGACTTCCAATGTGATTGTTTTGCCAGTCAAGGTTTTCACAAAAATCTGCATACCCCCACGAAGCC
GAAGAACCAAATGCAGGGTAGATTCCTTCTGGATATTGTAGTCAGCAAGAGTTCGACCGTCCTCAAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGATC
AGGAGGGATACCCTCCTTGTCTTGGATTTTAGCCTTGACATTGTCAATTGTATCAGAACTTTCCACCTCAAGAGTAATGGTTTTGCCAGTAAGGGTCTTC
ACAAATATTTGCATCCCACCACGAAGTCTAAGCACTAAATGGAGTGTAGATTCCTTCTGGATATTGTAATCGGCAAGCGTTCGGCCATCCTCAAGTTGCT
TACCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCTTTATCTTGAATCTTTGCCTTTACATTGTCAATTGTGTCTGAGCTTT