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Detailed information on CNT30202977


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1KXS6|RR11_HELAN, E-value = 4e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641762Helianthus annuusNymphaea colorata25.193.8390.23133forward
CNT30550215Helianthus annuusIpomoea triloba50.575.8387.27267forward
CNT30493471Helianthus annuusOlea europaea27.4636.991.03145forward
CNT30541469Helianthus annuusBrassica napus29.9210.3388.61158forward
CNT30511668Helianthus annuusSolanum lycopersicum15.1526.5893.7580forward
CNT30228020Helianthus annuusAnanas comosus50.1919.1686.79265forward
CNT30434619Helianthus annuusPapaver somniferum51.1440.387.04270forward
CNT3059026Helianthus annuusAmborella trichopoda25.579.4188.15135forward

Expression of CNT30202977

Peptides detected in this lncRNA

>peptide 1 (31 aa)
VNSIPLLRIARNAASLPRPGPLIMTSARCIP*

>peptide 2 (61 aa)
MNPFLFFHSKSNLLEVSTSGGRTPLDNPLLLFSFSQKRSFLFNSDIRKITIYNTKFLRLFFL

Sequence

>CNT30202977
AGTTAATAGTATACCACTTCTGCGAATAGCTCGTAATGCTGCGTCTCTTCCAAGACCGGGACCTTTAATCATGACTTCTGCTCGTTGCATACCTTGATCT
ACTACTGCACGAATAGCATTTGCCGCTGCGGTTTGAGCAGCAAACGGCGTCCCTCTTCTTGTACCTTGGAAGCCACAAGTACCGGCAGAGGACCAAGAAA
CCACTCGCCCTCGTACATCTGTAACAGTCACAATGGTATTATTGAAACTTGCTTGAATATGAATAACCTAGAATCATATCTTCATTATCTAAACGAACCC
GGAACATGCCATTGGGAAGCGATTCAGTAATTAAACCTTCATGAATCCATTTTTGTTCTTTCATTCCAAGTCAAACCTCCTTGAAGTATCAACTAGTGGA
GGAAGAACCCCATTAGACAACCCACTCCTTCTCTTTTCTTTTTCACAAAAAAGAAGTTTCCTATTCAATTCGGATATTAGAAAAATTACCATATATAACA
CAAAATTTCTCCGCCTATTCTTTCTAGT