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Detailed information on CNT3020283


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3036631Citrullus lanatusCucumis melo34.6238.0792225forward
CNT3049788Citrullus lanatusCucumis sativus27.5428.2893.85179forward

Expression of CNT3020283

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MKRIICFEVLIVCSIITTKINNGEGERDQALSYNRM*

Sequence

>CNT3020283
GATTGATTGGTGATGAAGTAACTTCAATCTGCTCCATTGGACTTTGAATCTGACCCGTCTCCTCTCACCTTTACTCCCGGAATATAAGACAACTTTTGAA
TCCAATCCAATGGTTTATGTACGATACGTCTGCCTCCGATCGGAGCTGTAGTTCTAAAGCTTAACTTGTCGTTCATGGGGTTTTTCTATACTTTCTGAAG
AATGAAGAGAATCATTTGTTTTGAAGTATTGATCGTTTGTTCCATTATCACGACGAAGATCAACAATGGTGAAGGTGAACGAGACCAAGCTCTAAGCTAC
AACAGAATGTAATGAAGGAAAGGAGTTCATCCAATTCAAGTTGAATCCAAGTGAAGGTTTATAGAGTTTACTAACCAATAGTTGTAGTCTTGGAACGGTT
TGAGGTCTGCGATGCAGCAGCCATTCGCTCCTTCCTTAATCTGAGATCATCTAACAGCTTCTGAGCAAAATCTGATCGCTTTGCCATGTTGGGTTTGCTG
GGTGGGAACTCACGGTAACGTCTCACGATAGAGTTTCTTTACATTGTTTTTTAGGCTATTTCTCAGTGGAAGAAGATTGCTGTGATTTCTTTTCATTGTG
GTTGGAAAGGTTCTCTCATGGTTGGGTGAGATGGGAAGTGTATTTTGAAC