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Detailed information on CNT30202556


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3090025Helianthus annuusSolanum tuberosum32.734.4499.07108forward

Expression of CNT30202556

Peptides detected in this lncRNA

>peptide 1 (31 aa)
GRDVAQLGSAFVLGTKCHGFKSCHPYLLLLL*

>peptide 2 (62 aa)
MSRVQILSSLPITAPLSSNEGFFEINSHWTYHIESFILMILYSMHTRRIGTNPFSFMIRKRS*

Sequence

>CNT30202556
GGAAGGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCAAATCCTGTCATCCCTACCTATTACTGCTCCTTTGAGCAG
TAACGAGGGGTTTTTTGAGATCAACTCACATTGGACATATCATATAGAATCTTTCATTCTTATGATACTATATAGTATGCATACAAGACGTATTGGGACG
AATCCTTTTTCTTTTATGATAAGAAAACGCTCTTAGTTCAGTTCGGTAGAACGCGGGTCTCCAAAACCCGATGTCGTAGGTTCAAATCCTACAGAGCGTG
ATTCGGATCTTCTTCCATCGAATTCGACTG