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Detailed information on CNT30202348


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678161Pisum sativumSetaria viridis19.1528.1183.65104reverse complement

Expression of CNT30202348

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MALILEGEAIHLRNYSIEHILLWILEQQHGLNALPKLRN*

Sequence

>CNT30202348
TATATTTTATACTGTGCCCAATACCGAAATTAGTTCTATACATATGACCACCAATGAGAAAAAGAATTGCAATAGCTAAATGATGATGGGCCATATCGGT
AAGCCATAAACTTTGCGTTTGAGGATGGGATCCCCCGAGAAGTGTTAGAATGGCAGTTCCCGCGCCTTGCGAAGTACTAAATAAATGATTACTAGAATCG
GGGTTTTGAGCATAAAGATTCCACTGACCTGTAAAAATGGCCCTAATCCTTGAGGGTGAGGCAATACACTTAAGAAATTATTCCATCGAACATATTCTCC
TCTGGATCCTGGAACAGCAACATGGACTAAATGCCCTGCCCAAGCTAAGGAACTGACTCCAAATAGTCCTGACAAATGATGATTGAGGCGGGATTCGGCA
TTTTTAAACCAGGAAACGTTCGGTTTCCATTTCGGTTGTAGGTGTAACCAGCCCGCTAATAAGGATATGAAAGAAAGAAATAATAGAAAAATAGCTCCAG
TATAAAGATCCTCATTAGTACGTAAACCAATTGTATACCACTA