Detailed information on CNT30202310


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004400, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3023562Pisum sativumPopulus trichocarpa85.53100.1395.122235reverse complement
CNT30176196Pisum sativumVigna angularis56.1897.6796.191468reverse complement

Expression of CNT30202310

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWRNQRGKKTLLSLTLVRLCEMT*

>peptide 2 (44 aa)
SESESHTCRDPKDGELCLSGAKPEETLVEARSDTDVQIVRLTWV*

>peptide 3 (87 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQFRTRRLLVDCLSCSRGESGSPRAGRGTDWERAFRGLFPGHRTVNSELVRTRGIRLFN*

>peptide 4 (40 aa)
MNRKLGYGAQLRANLDPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 5 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGGISGERRPC*

Sequence

>CNT30202310
TCTGAGAGTGAGAGCCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA
CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGG
AGCCCGAGGGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGTGT
GGCTGCTCTGTTGAGCCATGCCATGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCTGGGTTACG
GTGCCCAACTGCGCGCTAACCTAGACCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTA
ACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTAAAGCGCGCGACCTATACCCGGCCGTTGGGGCAAGGGCCAAGCCCTGATGAGTAG
GAGGGCGCGGCGGTCGCTGCAAAACCCAGGGCGCGAGCCTGGGCGGAGCGGTCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTT
TGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGACGGGGGAAGCCCGTCTGATAGCGCTCTAAGCG
CGTACACCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGTGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTTGGCGGGGGCCCCGGAAAG
AGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGG
TGCGCCCCTGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCTTCCATGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGT
CGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTTCCGAAC
CCGTCGGCTGTTGGTGGACTGCTTGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGTCGGGGGACGGATTGGGAACGGGCCTTTCGGGGCCTC
TTCCCCGGGCATCGAACAGTCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGTTGA
CGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCC
AAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGC
TTGGCGGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTGGAAACA
GCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGCGCTGCCCCTCTTTTTGGATCCAAGGCTGACTTTGGTT
GGTCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAA
CAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCT
TCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATG
TCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGT
TAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGC
CAGTGGCGCGAAGCTACCGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGATGCGTGCGCCCGCCGTTCACTTGCCGACC
AGCAGTAGGGGGCCTTGGCCCCCCAGAGGCACGTGCCGTTGGTGTACCCTGTAAGGTGGATGAGCCTTGCGGGACACTATGAAACGCAATTCCTATTGAG
CGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACAGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTTGT
CGCTTCGATTCGT