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Detailed information on CNT30202140


BLAST search results

BLAST vs Swiss-Prot:
sp|Q19V63|YCF3_CHLAT, E-value = 1e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30359977Pisum sativumLactuca sativa20.3512.3288.64220forward
CNT30103641Pisum sativumOryza rufipogon18.6929.3689.11202forward

Expression of CNT30202140

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MELITRKEVNYMSFKLAFGLIIQFNRLFLVLSFLLPSEE*

Sequence

>CNT30202140
AACTCCTTATAAATTTTGATTCATTAACAAATATATCGGCAATAAAAAAAAGAATCTTGATAAAACTCTTTCACTTCACATAGAATTCGACATAAATGAA
TGTGAGAAAATTGAAAGAAAAAAAAAGAAAATAATAAAAAGACTGTTCTTATTCAAAACGCCCTGTGATCTTCAACCAATTTTGTGCCTCAATATAATTA
CCAGGGGTAAGGGCTATAGCTTGTTTCCAATATTCAGCAGCTTGATTAGAATTCGACAGAAATGAATGTGATAAAATTGAAAAAAAAAAAAGAAAATAAT
AAAAAGACTGTTCTTATTCAAAACGCCCTGTGATCTTCAACCAATTTTGTGCCTCAATATAATTACCAGGGGTAGGGGCTATAGCTTGTTTCCAATATTC
AGCAGCTTGATCAAACCAAGATTCTGCAATTTCAGAATCTCCCTGTCGAATGGCCTGTTCTCCGCGGTCGGAATAGGTGAGTAAAATCCTTCCCTTAGAA
CCGTACTTGAGAGTTTCCTGACTCATACGGCTCAACAGTCAATTCTTTTGATCTTCCATGGAGTTAATAACGAGAAAAGAGGTTAATTACATGAGTTTCA
AACTTGCCTTTGGATTAATAATTCAATTTAATCGTTTGTTTTTAGTTTTATCTTTTCTCCTACCTTCTGAAGAATAAAGCATCGATATTAACACTAACGC
CCTTATTCTCATTTTCTGAAAGGTAACTATCTCGATTTCATATATCATTTCATATATAATATATCTATTTCTATAGAATCTTTGAGAAAGACTTTTCTTC
ATAAGAAAAGACTTACTATCTTTGGGATCCGATACTACACCGCTGCTCAAAACCTTAGGGGATCAACTTTATTACATAAGTTGATTTCTAATCTATCATC
ATATAAGTAAGCAGTTCTTGTTGTATCGGCCAAAAACCTTGTTAATTGATCTTTACGTCTCGATTTCATATATCATTTCATATATAATATATCTATTTCT
ATAGAATCTTTGAGAAAGACTTTTCTTCATAAGAAAAGACTTACTATCTTTGGGATCTGATACTACACCGCTGCTCAAAAC