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Detailed information on CNT30202121


BLAST search results

BLAST vs Swiss-Prot:
sp|P32295|ARG7_VIGRR, E-value = 2e-17

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30144937Pisum sativumMedicago truncatula9.4932.0584.96133forward

Expression of CNT30202121

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MIQEQQINSQDYSLALQVRSCKNRSSVRGVVRPPIE*

>peptide 2 (55 aa)
MFLLSVSWLQNITSKVPRSCLITTTSFQPMIEQDCELFIVFPQSKLIQIPLESPI*

>peptide 3 (35 aa)
VQLFQLSGCHLTITVTLRPLFLKVMVHIKWIIIDL*

>peptide 4 (48 aa)
SIIPTLWMPPNYNSNIEALISKSDGAYKVDHYRPIVMVILSLRLSSKC*

Sequence

>CNT30202121
GTTCAATTATTCCAACTCTCTGGATGCCACCTAACTATAACAGTAACATTGAGGCCCTTATTTCTAAAAGTGATGGTGCATATAAAGTGGATCATTATAG
ACCTATAGTCATGGTGATTTTAAGTTTAAGATTATCATCAAAGTGCTAGCTGACAGACTTGCTACTATTTTGCTTGGTATTATTTGTTCACAACAAAGAA
GTTTTATGAAGGGAAGAAATATCACTGACGGCATTTGTTTGTTAATATGCTTCATCCTAGATCTTTTGGAGGATATATTTTCATGAAAATTGACAGTAGA
TAGACATGTGATATTATTGATTGAGGATTCTTAATTGAAGTTTCGCAACTGGATTGAAGGGATCCTTAAATATGCCAAATTATCTATTTCTCTATAAATG
ATAAAGTTGCATGTTTCTTTTCTTACAAGAGAGAGGTGAGACAAGGGAACCCCTTATCCCTCTTTTACTTTTGCCTTGCAGAAGAGGTCTTGAGTAGAGC
AATTACTAGTCTGGATGATAATGGTTAGCTTTTTATGATCAATGGTCCAAGAGGAAATCAAATCCCTGTAGACGTTTTATATGTTGATGATGTTTTGAGT
TTTTACTAGGGAACCATGTCTAGTATGAGAGTTATTCAAAATTTGACATGATTACATTCCTCCTTCAAAGTCTACTCAATTCTGGAGGATTGTTTACAAC
AAAATAGTTACTCATGAAAATCTAATCAGAAGAGGTCTTTGCGTGGATTTTCAAACTATCATACTGTTGATGCTTTTAAGTGTCATACTAGTCAAAGCTC
TTCATTTAAGATTCATAAACAGACATAAGTAGGCAAGAGATCATGGCCTAATGTGGACGAGTCTCTAGCTATTGAGTTTTCGTCTCAATATATCCAAGGT
AAAGGGTGCATGGCTCGTGTTTGTGCCTGCAAAGCAAGTATTTAAGATGATACAAGAACAACAGATAAATTCACAAGACTATAGTTTGGCCTTACAAGTG
AGAAGCTGTAAGAACAGATCTTCGGTTCGGGGAGTTGTAAGACCACCTATTGAATGACAGTAACCGAGTTCCTCTTCAACTAGGCATAGAAATTCTTGAA
ACAAAGGCTCGTTCAAGAGTGATACAGGAATCAAGTACTTCTTCATTTACGCTCCAACATACGCCATAAGATAACCTTTTGATAGAGCAATCAACTGAAC
ATAAGTTGCCGGAGAGTTAAATGTTTCTTTTGTCTGTTAGTTGGCTTCAGAATATAACTTCAAAGGTCCCAAGAAGTTGTCTGATCACAACAACTTCGTT
TCAGCCGATGATCGAGCAAGACTGTGAATTATTCATAGTTTTTCCTCAATCTAAATTAATTCAAATACCATTGGAATCACCAATTTGATGGGCATTATGT
AT