CANTATAdb - search

Detailed information on CNT30202040

BLAST search results

BLAST vs Swiss-Prot:
sp|P05310|PSAA_PEA, E-value = 3e-146

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30730522	Pisum sativum	Corchorus capsularis	54.2	77.2	90.84	535	forward
CNT30219784	Pisum sativum	Hordeum vulgare	46.5	98.5	90.41	459	forward
CNT3086956	Pisum sativum	Vigna radiata	25.94	9.34	91.41	256	forward
CNT30511784	Pisum sativum	Solanum lycopersicum	28.17	42.31	91.01	278	forward
CNT30369168	Pisum sativum	Oryza glumipatula	21.88	59.18	87.96	216	forward

Expression of CNT30202040

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MLAKSEKNQRLFVFRGNLPLHHHSIFLGLLLAKPLGH*

>peptide 2 (29 aa)
MVIQHGFYILKPDQFWSSFVIMKPTSKKH*

>peptide 3 (29 aa)
EENFLFLPTRSCCTGQQTLVNHFSNCVSR*

>peptide 4 (46 aa)
MGSLSTKILTSGSAKIWTFGSGERIIIESSSFRTTHTKRPANIKHN*

>peptide 5 (41 aa)
MRNVYIEYLSPIYLFYIFLSYSLEQLGSGSESGASVRIYYDI

Sequence

>CNT30202040
TGAAGAGAATTTTTTATTCTTACCAACTCGATCTTGTTGCACCGGGCAACAAACATTGGTGAACCATTTCTCGAACTGCGTGTCGAGATAATCCAAAGTG
TCGATAATTACCCCGTGAGTCTCGGTCGCCAAACAACTTCGTGAGACGTGTGGTGCCTATTCGCGACCTGCCAAATGGTGATTCAACATGGATTCTACAT
CTTGAAACCAGACCAATTTTGGAGCAGCTTTGTGATAATGAAACCAACCAGCAAAAAGCATTAAGGCTGCAAAGACCAACGCACCGATTGCAGTACAATA
GAGTTGTAATTCACTAGTTATTCCAGATGCTCGCCAAATCCGAAAAAAACCAGAGGTTATTTGTATTCCGCGGAAACCTCCCCCTACATCACCATTCAAT
ATTTCTTGGCCTACTATTGGCCAAACCACTTGGGCACTAGGTCGAATGTGAGTAGGATCATTTAGCCATGCTTCATAATTGGAAAAACGAGCCCCATGGA
AATACATGCCACTCAGCCAAAGAAAGATAATGGAGAGTTGGCCGAAATGAGCACTAAATACTTTTCGGGAAATCTCCTCTAAATCACTAGTATGGCTATC
GAAATCATGAGCATCAGCATGTGGGTTCCAGATCCAAGTAGTAGTATCAGGTCCCTTAGCTATTGTTCTTGAGAAATGACCAGGTTTTGCCCATTGCTCG
AAAGACGTTTTTATGGGATCCCTATCTACCAAAATTTTGACTTCTGGATCTGCTAAAATTTGGACTTTTGGTTCCGGCGAACGAATAATCATTGAGTCCT
CCTCTTTCCGGACAACACATACAAAGAGACCCGCCAACATAAAACATAATTAGTGAACTTATGAGAAATGTTTATATTGAATATCTTTCTCCCATCTATC
TATTCTATATTTTCTTGAGTTATTCACTAGAACAATTAGGATCCGGAAGTGAATCCGGGGCAAGTGTTCGGATCTATTATGACATAG