Detailed information on CNT30202034


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525072Pisum sativumPhaseolus vulgaris13.4553.6396.07229forward
CNT30664460Pisum sativumTriticum dicoccoides21.299.7293.07361reverse complement
CNT30357533Pisum sativumLactuca sativa24.941.6595.05424reverse complement

Expression of CNT30202034

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MDRSPRFGSISSDSSPMKTRFRYGSGGFP*

>peptide 2 (38 aa)
MLLGSEHKLVMLSATGLSPSRVQHSTASPSSTTLVLLSY

>peptide 3 (43 aa)
MSSQLLRLNAFRGEPASSGFDWHSPLTTTHPLIFQHQSVRTST*

>peptide 4 (61 aa)
MSRRLILQQARGQSPSSSHCLGAYGFMFYFTPRQGFFSPFPHGTTSLSVTQEYLALQGGPC*

>peptide 5 (30 aa)
MASITLAPECAPRTRTRILARGIFSTPYLP*

>peptide 6 (62 aa)
YTFRHWAGVSPHTWSYDFAETCVFGKHRPGLVTATPFVRRHPFSRSYGAILPSSLERVVSRP*

>peptide 7 (30 aa)
IPSGTGQASAPIHGLTTLRRPVFLVNIARA*

>peptide 8 (51 aa)
MSSQLLRLNAFRGEPAIASIWYRSRGPRRNSALPLDVQSTAAPQRISGRTS*

>peptide 9 (56 aa)
MFSLLKPTFSLPLRPTLLARVLLSKAERSPTDSFLHPTASANRLAPFIFGARALDQ*

Sequence

>CNT30202034
TATACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACATCGCCCGGGCCTAGTCACTG
CGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTAC
CTACCCACCTGTGTCGGTTTCCGGTACAGGTACCCTCTTGTTGTAGGTCGTTCAAACTTTTCCTGGGAGTATGGCATCAATTACTTTAGCGCCAGAGTGC
GCGCCTCGTACTCGTACTCGAATTTTGGCTCGAGGCATTTTCTCTACCCCTTACTTACCCTGAAAAAACAGGGAGTCACCTTACGTTCTTGAACCGATAA
CCATCTTTCGGCTAACCTAGCCTCCTTCGTCCCTAGAGACCAACAAGGGGCAGTACAGGAATATTAACCTGTTGTCCATCGACTACGCCTTTCGGCCTGA
TCTTAGGTCCTGACTTACCCTCCGTGGACGAACCTTGCGGAGGAATCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTTCGTTACTCAAGCCGA
CATTCTCGCTTCCGCTTCGTCCAACCCTGCTCGCGCGGGTACTTCTTTCTAAGGCGGAACGCTCCCCTACTGATTCATTTTTACATCCCACAGCTTCGGC
AAATCGCTTAGCCCCGTTCATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTGAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCT
ATCTCTGCACTCCTACCTCCTTTATCACTGAGCGATCATTTAGGGGCCTTAGCTGGTGATCTGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCAT
CGTCTCACTGGCCGACCTTGACCCGTCGGTGTCATATCTAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTCTCGCGGCCCGCGCCGAAACAGTGCTTT
ACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTATTGCCTCGATTTGGTACCGCTCTCGCGGCCCGCGCCGAAACAG
TGCTTTACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGATTGGCATTCACCGCTAACCACAAC
TCATCCGCTGATTTTTCAACATCAGTCGGTTCGGACCTCCACTTAGTTTCACCTAAACTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATA
AGCAGTGACAGTAGCCCTATGAAGACTCGCTTTCGCTACGGCTCCGGTGGTTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACA
GGCACGCGGTCAGAGCCCCAGCTCCTCCCACTGCTTGGGGGCTTACGGTTTCATGTTCTATTTCACTCCCCGCCAGGGGTTCTTTTCACCTTTCCCTCAC
GGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGAATTTCACGTGCCCCATGTTACTCGGGTCAG
AGCATAAGCTAGTGATGCTTTCGGCTACTGGACTTTCACCATCTAGGGTGCAACATTCGACTGCTTCGCCTAGCAGCACGACGCTTGTATTGCTCTCTTA
TAT