Detailed information on CNT30201983


BLAST search results

BLAST vs Swiss-Prot:
sp|P93401|NU2M_OENBE, E-value = 2e-56

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373827Pisum sativumArabidopsis thaliana29.0838.9696.74399forward
CNT30708145Pisum sativumGlycine max10.9352.6396150forward
CNT3091836Pisum sativumSolanum tuberosum72.1634.7691.41990forward
CNT30664613Pisum sativumTriticum dicoccoides16.1157.2594.57221forward
CNT30463939Pisum sativumSaccharum spontaneum32.9435.1592.92452forward
CNT30655387Pisum sativumRosa chinensis15.631.3394.39214reverse complement
CNT30689350Pisum sativumTriticum urartu29.6626.0194.59407forward
CNT30483162Pisum sativumChara braunii11.0169.2782.12151forward
CNT30418817Pisum sativumPapaver somniferum6.6342.9292.3191reverse complement
CNT30103440Pisum sativumOryza rufipogon29.6625.1294.84407forward

Expression of CNT30201983

Peptides detected in this lncRNA

>peptide 1 (40 aa)
EVSGPFFFRCLGYTFGIPQKGIYLYFPQSSLYATPTLLSS*

>peptide 2 (64 aa)
MWLVHDNLFGFARTSGPITKWGCSLQHERTFSKQVRNGPSQVLLIMSPSPLSWGVFGFTRESPP*

>peptide 3 (42 aa)
MRKDVDRSPRIDNYIEGLYKSIYSFIFSSPHKITNEVCKFHI*

>peptide 4 (39 aa)
MITYSDLRELADQSLSGDAPSSMSEPFRNRLGMGPARFY*

>peptide 5 (33 aa)
MHLKSNISSRLPWKIQTFFLMLPSHKNINFEAQ*

>peptide 6 (84 aa)
MNSKASNLSCSEELKHIEMVPAVLNNRRIWQKYVKLSLQKRLFRNKWAIVRRGAPAASRSKVIRYLRKARPEPHVQVSLHVARP*

Sequence

>CNT30201983
TTGAAGTCTCGGGCCCTTTTTTCTTTCGTTGCCTAGGTTACACCTTCGGAATACCCCAGAAGGGAATTTATCTCTATTTCCCTCAATCTTCACTTTACGC
CACGCCGACTCTCCTTTCGTCATAAGGCGTGGAATTAGACCAAGGGGAATCTCCATAGGAACTAGTCCCTTAGATTTCTCACGTAGGAGATCGAGACACA
ACCCCGGGGCTATGAGGAAAGATGTAGATCGATCGCCTCGGATAGACAACTACATAGAGGGTCTCTACAAGTCTATATATTCTTTTATATTTAGTTCCCC
CCATAAGATCACCAATGAGGTCTGCAAGTTTCACATCTAAGTAATACCCGATCCAATAGTTTACGATATATATTTAACAACAACATTCTAAGCTAAGAAA
GGAGATTTTTAGATATCGGTAGTTGTCCGGTCGTACCCAAACAATAAGATTCCAGAGGAAAATGCACCTAAAATCAAATATTTCGAGCCGGCTTCCGTGG
AAAATTCAGACTTTCTTTTTGATGCTGCCATCACATAAAAACATAAACTTTGAGGCTCAATAGATAAATACATGGCAATTGAATCATGAGCCGAGATCAT
AAAGAGCATACTGCGAGTAGGAAGTGGAATTAATACAATGAATTCAAAAGCATCAAACCTCTCTTGTTCGGAAGAATTGAAACACATCGAAATGGTACCA
GCCGTACTTAATAATAGAAGGATTTGGCAGAAATATGTAAAATTGTCCCTCCAAAAAAGATTATTTCGGAATAAATGGGCAATAGTTAGGAGAGGTGCGC
CAGCGGCGAGCAGAAGCAAGGTTATTAGATACCTCAGGAAAGCCCGGCCAGAACCACACGTGCAAGTTTCCCTGCATGTGGCTCGTCCATGATAACTTAT
TCGGATTTGCGCGAACTAGCGGACCAATCACTAAGTGGGGATGCTCCCTCCAGCATGAGCGAACCTTTTCGAAACAGGTTAGGAATGGGCCCAGCCAGGT
TCTATTGATTATGTCCCCTTCCCCCTTGTCTTGGGGCGTCTTTGGCTTTACGAGAGAAAGCCCGCCATAAAAGTCTTTATCTTCTCGTCCTGGAGAATAT
TCCGGTGCGTCCACAGAAGAGGAAATTGCAATGCATCTTGCTCAGCAGGCGTAGCTTGGAGTGGGAGTGTAGCGTGGGTAAGGTAAGTGGCCGCCAGAGA
GGAAGCCGGCCTATTAAGCGCAGCTAAGCTAATATGCGCCGGAGAAAGCCTGGTGCCGGAGGTAAGCTCTATTCTTTTCGGCCCGGAGCATTGATTCCCC
ATAACGAATAGGCTAGCTCTATCTCTCAATTGCCTATCCTGTGCTCGAGAAGGTCCCCCAGTTCCTCGGCAG